| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2087 |
|---|
| Symbol | ftrA |
|---|
| ID | 4007418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1066367 |
|---|
| End bp | 1067332 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637950620 |
|---|
| Product | transcriptional activator FtrA |
|---|
| Protein accession | YP_553250 |
|---|
| Protein GI | 91778042 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.31788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATC ATCTCGTCGT CGCGCTCGCT TACGACCGGC TCTGCACCTT CGAATTCGGC
TGTGTGACCG AGCTGTTCGC GCTCGAACGT CCCGAACTCG ACGTGGACTG GTATCGCTTT
GCGGTCTGCG CAAGCGAGCC GGGCCCGATT CGCGCGGCAG GCGGCGTGAC TCTCGCCGCG
CCTTACACGC TCAAGTTGCT GGAGCGCGCG GACACGATCG TGATTCCCGG CTGGCGTGAT
GCCGGCGAAG TGCCACCCAA ACCGCTGCTA AAGAAGATTC GCGCGGCTTA TGAACGCGGC
GCGCGCCTCT GTTCGATCTG CTCCGGTGTG TTTGTGCTCG CGGCCGCGGG GGTGCTCGAC
GGCAAGACCG TCACGACCCA CTGGCGCTAT GCCGACACAT TGCAGCAGCG CTATCCGCAG
TTGCGCGTGC AGCCGGACGC GCTCTATGTC GACGAAGGGC AGATCATCAC GTCGGCGGGC
TCGGCAGCGG GGCTCGACAT GCTGTTGCAT CTGGTGAGGC GCGATCACGG CAGCGCGGTC
GCGAACCGGG TCGCGCAGCG GCTCGTGGTG CCGCCGCATC GCGAGGGCGG GCAGGCGCAG
TTCGTGCCGC GTCCCATGCC GCACGGCGAA AGCGGCCGCC TGTCCAGACT GATGGACTGG
GTGCGCGGTC ATCCCGCCTT GCCGCACACC TTGCGTTCAC TCGCCGAGCG CGCGGCGATG
AGTCCACGCA CATTGCAGCG GCAGTTTCAC GACGCCACCG GCATGGCGCC CTATGAGTGG
CTTGTGCGCG AGCGCGTGGC CATTGCGCGC GAGCTGCTCG AAGCGCGGGC GCTGCTGCCT
ATGGCGCGCG TGGCGGAGCT GGCGGGATTC GGTTCCGAGG AATCGTTGCG TCGGCATTTC
CGGCGCATTG CGTTGACGAG TCCGGCTGCG TATCGCAAGA AGTTCGGCGC GCGGGAAACG
GCTTAG
|
|---|
| Protein sequence | MHNHLVVALA YDRLCTFEFG CVTELFALER PELDVDWYRF AVCASEPGPI RAAGGVTLAA
PYTLKLLERA DTIVIPGWRD AGEVPPKPLL KKIRAAYERG ARLCSICSGV FVLAAAGVLD
GKTVTTHWRY ADTLQQRYPQ LRVQPDALYV DEGQIITSAG SAAGLDMLLH LVRRDHGSAV
ANRVAQRLVV PPHREGGQAQ FVPRPMPHGE SGRLSRLMDW VRGHPALPHT LRSLAERAAM
SPRTLQRQFH DATGMAPYEW LVRERVAIAR ELLEARALLP MARVAELAGF GSEESLRRHF
RRIALTSPAA YRKKFGARET A
|
|---|
| |