Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1832 |
Symbol | |
ID | 4007675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1340920 |
End bp | 1342344 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637950861 |
Product | carbohydrate porin |
Protein accession | YP_553486 |
Protein GI | 91778278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.325541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.378247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGCG CCGCGCTTTG CACGGCGTTC GCGTGGGCTT CGCTGACAGC CGGCGCGGCG ATGGCCGAAG CCAATCCCGA CGCCACACCG GAAGCGCCCG AGGCCGACCT GAAGATTCAG GCGACCCAGA CGAACCAGTG GACCGGCTTC TGGAACCGAC AGCAGATGCT CGGCGACATT GGCGGCCTGC GCCCCTGGCT CGGCAAATAC GGCGTGACCT TCACGCTCAC CGAAACCAGC GAAGTGCTCG CCAACCTGCG CGGCGGTCTC GCGCATGGCG CCGACTACGA CGGCTTGACC ACCGGCACCG TGCAACTGGA CACGCAAAAG GCATTCGGTC TGCCGGGAGG CCTGTTCAAC GTCAGCGCCT TGCAGATCCA CGGCGCCAAT CTCAGCGCCA ACAAGCTCGG CACGCTGAAC ACGGCGAGCG GCATCGAAGC GGACGACACC ACCCGCCTGT GGGAATTGTG GTACCAGCAG TCGTTCCTGA ACAAGCGCAT CGACGTGAAG ATCGGTCAGC AAAGTATCGA CCAGGAATTC ATCACCAGCA CGTATTCGGC GCTGTTCGTC AACACCATGT TCGGCTGGCC CGCCCTGCCC TCGTATGACA TGCCGTCCGG CGGCCCGGCC TATCCGCTGT CCGACCTCGG CGTGCGCGTG CGCGGCCAGA TCACGCCTTC ATTGACCGCG CTGGCCGGCG TATTCGACGG CGATCCGCTC GGCAACAACC CGGACAACAA GAGCGGCACC AACTTCAACC TGCACAACGG CACACTGTTC ATCGGCGAAT TGCAGTACGC GATCAACCAG CCGGCCGACG GCGAAATGGT CGGCGCGGGC GGCGGCGGTT TGCCCGGCAC CTACAAGCTC GGTGTCTGGT ACAACAACGG CAGCTTCGCG GATCAACGCT ACGACAACAC GGGCCTATCG CTCGCCAATC CGGCCACCAG CGGCATCGCC CAGAATCATC ACGGCGACTA CAGCTTCTAC GCGGTGGCCG ACCAGATGAT CTGGCGTCCG GACCCGGACG AACCGCGCAG CATCGGCGTA TTCGCGCGCG TGATGGGCGC GCCCGGCGAC CGCAACCTGG TGAGCCTCGC CGCCAACCTC GGCGTGGTGA TGAAAGCGCC GTTCGCCGGC CGCGACAACG ACAGCGTGGG TCTCGCGCTC ACCTACATCA AGGTCGGCAA CCACGTGAAC GGCCTCGATC TGGATAGCCG CGCATTCAGC AACGGCCCAT ACGGCGTGCG CACCAGTGAA ACCACGCTCG AGGCGACCTA TCAGTATCAG GTCAATCCGT GGTGGCAACT GCAAGCCGAC GCGCAATACA CGTTCAACGC CGGCGCCGGC CAGAACCCGA ACGATCCGAC GCAGCCGCTG CGCAACACGT TCGTCATCGG CCTGCGGACC AACATCAATT TCTGA
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Protein sequence | MRRAALCTAF AWASLTAGAA MAEANPDATP EAPEADLKIQ ATQTNQWTGF WNRQQMLGDI GGLRPWLGKY GVTFTLTETS EVLANLRGGL AHGADYDGLT TGTVQLDTQK AFGLPGGLFN VSALQIHGAN LSANKLGTLN TASGIEADDT TRLWELWYQQ SFLNKRIDVK IGQQSIDQEF ITSTYSALFV NTMFGWPALP SYDMPSGGPA YPLSDLGVRV RGQITPSLTA LAGVFDGDPL GNNPDNKSGT NFNLHNGTLF IGELQYAINQ PADGEMVGAG GGGLPGTYKL GVWYNNGSFA DQRYDNTGLS LANPATSGIA QNHHGDYSFY AVADQMIWRP DPDEPRSIGV FARVMGAPGD RNLVSLAANL GVVMKAPFAG RDNDSVGLAL TYIKVGNHVN GLDLDSRAFS NGPYGVRTSE TTLEATYQYQ VNPWWQLQAD AQYTFNAGAG QNPNDPTQPL RNTFVIGLRT NINF
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