| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1707 |
|---|
| Symbol | |
|---|
| ID | 4007799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1481898 |
|---|
| End bp | 1482587 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637950984 |
|---|
| Product | branched chain amino acid ABC transporter ATPase |
|---|
| Protein accession | YP_553609 |
|---|
| Protein GI | 91778401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.00153599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATG TGGACGACGT ATTCGTCAGT TATGGCCAAA GCGAGGCCTT GCACGGCATC
AGCTTCAACG CCGCCCGCAA CGAGACCGTG GCGATCATGG GGCGCAACGG CATGGGCAAG
ACCACGCTGT TCAAGTCGCT GATCGGTATT CTGCCGCTGA AAGCGGGGTC GGTGAAACTG
GATGGCGAAG AGGTGTCGCG CGACGAAAGT TTCCGGCGCG TCGCCAAAGG TATCGCGTAT
GTGCCGCAGG GCCGGCAAAT CTTCGCCACG TTGAGCGTGG AGGAGAACAT CCAGACCGGT
CTGGAGAACT CGCCCACGAA GCGCGTGCCC GATGAAATCT ACGCGCTCTT TCCGGTGCTC
TACGAGATGC GCTCGCGCAA GGGCGGCAAC CTGTCCGGCG GCCAGCAGCA ACAGCTGGCG
ATTGCCCGCG CGCTGGTCAC GGAGCCCAAG GTGCTGCTGC TCGACGAGCC CACCGAGGGC
ATTCAGCCGT CCATCATCAA GGACATCGCG CGGGCGTTGA ACGAGATCCG CAAGCTGCGC
GACATCACGA TCGTCGTGTC CGAGCAGGTG CTGAGTTTCG CGCTCGATGT GGCCGACCGG
CTCTTCGTGA TCGAAGGCGG GCGCCTCGTG CATGAGAGCA CGCGCAGCGA CGCCGACACC
GTGAAGATCC GCGAGTACCT GTCGGTGTGA
|
|---|
| Protein sequence | MLNVDDVFVS YGQSEALHGI SFNAARNETV AIMGRNGMGK TTLFKSLIGI LPLKAGSVKL
DGEEVSRDES FRRVAKGIAY VPQGRQIFAT LSVEENIQTG LENSPTKRVP DEIYALFPVL
YEMRSRKGGN LSGGQQQQLA IARALVTEPK VLLLDEPTEG IQPSIIKDIA RALNEIRKLR
DITIVVSEQV LSFALDVADR LFVIEGGRLV HESTRSDADT VKIREYLSV
|
|---|
| |