| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1687 |
|---|
| Symbol | |
|---|
| ID | 4007819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1502699 |
|---|
| End bp | 1503445 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951004 |
|---|
| Product | polar amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_553629 |
|---|
| Protein GI | 91778421 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0763978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.68129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATG CGTTCGATTT CAGCGGCTTC GGCCTCTATG CGGGGATGCT CGCGCGCGGC
GTCGCCGTCA CCCTGGGCCT GACGGCCGTT TCCACCGTGC TCGGCGCGAT TGTCGGCATT
GCCGGTGCGA GCGTGGCGGT GGCCGGACCG AAATGGGCGC GCTGGCTGGT GGCGGGTTAT
GTGGAACTGA TCCGCAACAC GCCGTTCATC GTGCAGTTGT TCTTCGTGTT CTTCGGCTTG
CCGAGCCTCG GTATCCATAT CGACGAAGTG CAGGCCGCGA TTCTGGCCAT GACCGTCAAT
CTCGGCGCTT ACGCGATCGA GATCGTGCGC GCCGGCATCG ATTCGATTTC GCGCGGCCAG
GTGCAGGCGG CGCAGGCGCT CGGTCTGCAT GGGCGGCAGG TGTTCCGCTA TGTCGTGCTG
CCGCAGGCCA TCGCCAATGT GTTTCCCGCG CTGCTGAGCC AGGTGCTGAT CGTGATGCTG
GGCTCGGCGG TGGTCTCGCA AATCTCCGTG CCCGATCTCA CGTACGCGGC CAACTTTATC
CAGTCGCGCA ACTTCCGTTC GTTCGAAAGT TACCTGATCA TCACCGCGAC GTATCTGGTG
CTGTCCATCG TATTGCGGCA AATCCTCAAC CGGCTCGGCC GCGGTCTGTT CGCGGGCCGG
GCGGCGCGCG GCAACGAAAG CGCGCCGCGT AACTGGCGCA ACCGCCTGAT GTGGCGCGGC
GCCCGCACTC TGCCCACGGA GCGTTGA
|
|---|
| Protein sequence | MTYAFDFSGF GLYAGMLARG VAVTLGLTAV STVLGAIVGI AGASVAVAGP KWARWLVAGY
VELIRNTPFI VQLFFVFFGL PSLGIHIDEV QAAILAMTVN LGAYAIEIVR AGIDSISRGQ
VQAAQALGLH GRQVFRYVVL PQAIANVFPA LLSQVLIVML GSAVVSQISV PDLTYAANFI
QSRNFRSFES YLIITATYLV LSIVLRQILN RLGRGLFAGR AARGNESAPR NWRNRLMWRG
ARTLPTER
|
|---|
| |