Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1598 |
Symbol | |
ID | 4007913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1604122 |
End bp | 1607124 |
Gene Length | 3003 bp |
Protein Length | 1000 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951096 |
Product | sarcosine oxidase, alpha subunit, heterotetrameric |
Protein accession | YP_553716 |
Protein GI | 91778508 |
COG category | [E] Amino acid transport and metabolism [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.898229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA AAGACCGACT CCCCAACGGC GGGCGCATCA ATCGCGCGAT GCCGCTGACG TTCACGTTCA ACGGCCGCCA GTACCAGGGC TATCAGGGTG ACACGCTGGC TTCGGCGCTG CTCGCGAACG GCGAGCATTT CGTGGCGCGT AGCTGGAAGT ATCACCGGCC GCGCGGCATC GTCACGGCAG GCGTGGAAGA GCCGAATGCC GTGGTGCAAC TCGAAACCGG CGCCTACACG GTGCCGAATG CGCGCGCCAC CGAAGTCGAG TTGTACCAGG GGCTCGTCGC CACCAGTGTG AACGCGAAGC CGAGCATCGA AAAAGACCGC ATGGCGGTCA ACCAGAAGAT CGCGCGCTTC ATTCCGGCGG GCTTCTATTA CAAGACCTTC ATGTGGCCGC GCAAATTCTG GCCGAAGTAC GAAGAAGTGA TCCGCGACGC GGCCGGTCTC GGCAAGGCGC CGGAACACAC CGACGCGGAC CGCTACGACA AGTGCTTTGC GCATTGCGAC GTGCTGGTGG TGGGCGGCGG CCCGACCGGC CTTGCGACCG CGCACGCAGC CGCGTTGTCC GGCGCGCGCG TGACGCTGGT CGACGATCAG CCGGAACTCG GCGGCTCGCT GCTGTCGTGC CGCGCGGAGA TCGACGGCAA GCCCGCGCTG AACTGGGTGC ACAAGATCGA AGACGAACTG CGGCAAATGC CCGACGTGAA AATCCTGTGC CGCAGCACGG CGTTCGGCTA TCAGGACCAC AACCTCGTGA CGGTCACGCA GCGGCTCACC GAGCATCTGC CGGTATCGCA GCGCAAGGGC ACGCGCGAAC TGATGTGGAA GATCCGCGCG AAACGGGTGA TTCTCGCGAC CGGCGCGCAT GAACGGCCCA TCGTGTTCGG CAACAACGAT CTGCCGGGCG TGATGCTGGC GTCGGCCGTG TCGACCTATC TGCATCGCTA TGCGGTGCTG CCGGGCCGCA ACGCGGTGGT CTTCACGAAC AACGACGACG GCTACCAGTG CGCGCTCGAT CTGAAAGCGG CCGGCGCCCA GGTGACGGTG GTCGATCCGC GCGCGGGCGA ATCGAAGGGC ACGCTGCCGG CGCTCGCAAG GCGCTATGGC GTCAAGGTGA TGAGCGGCAC GGTGATCACT GCGGCGCACG GCAAACTGCG CGTGGCTTCG GTCGAACTGG CGTCGTATTC GAACGGACAG GTCGGTGCGA AGCAGGGCGA GCTGTCGTGC GATCTGCTCG CCATGTCCGG CGGCTGGAGT CCGGTGCTGC ACCTGTTCGC GCAATCGGGC GGCAAGGCGC ACTGGCATGA CGGGAAGGCC TGCTTCGTGC CGGGCAAGGC GATGCAGGCG GAAACGAGCG TCGGCGCCTG CGCCGGCGAC TTCACGCTCG GCCAGGGCAT CCGCTTTGCG GTGGATGCGG GCGTCGAGGC GGCGCGCGCG GCGGGCTTCA TCGTGGCACG GCCGAATCCG GTGCAGGTGG CCGAGATCAC GGAAGCGACG ATGCTGCCGC TGTGGCTGGT CGGCGGCCGC GAACTGGCCA CGCGCGGGCC GAAGCAGTTC GTCGACTTCC AGAACGACGT GTCGGCCGCG GATATTTTCC TCGCGGCGCG CGAAGGGTTC GAATCGGTCG AACACGTGAA ACGCTATACG GCAATGGGTT TTGGCACCGA CCAGGGCAAG CTCGGCAACA TCAACGGCAT GGCGATTCTC GCGCAGGCGC TCGGCAAGAC GATTCCCGAA ACCGGCACGA CCACGTTCCG GCCGAACTAC ACGCCGGTCA GCTTCGGCAC GTTTGCCGGC CGCGAGCTGG GCGAGTTTCT CGACCCGGTG CGCAAGACGG CGGTGCACGA ATGGCACGTG GAAAACGGCG CGGCCTTCGA GGACGTGGGC AACTGGAAGC GCCCGTGGTA CTACCCGAAA GCCGGCGAAG ATCTGCACGC GGCAGTGGCG CGCGAATCGC TCGCGGTGCG CACGAGCGTC GGCATTCTCG ACGCCTCCAC GCTCGGCAAG ATCGACATTC AGGGTCCCGA TTCGGCGAAA CTGCTGAACT GGGTCTATAC GAATCCGTGG AGCAAGCTGG AAGTCGGCAA GTGCCGCTAT GGTCTGATGC TCGACGAAAA CGGCATGATT TTCGACGACG GCGTGACCGT ACGCCTCGCC GACCAGCACT ACATGATGAC CACCACCACC GGCGGCGCGG CGCGCGTGCT GACGTGGCTC GAACGCTGGC TGCAAACCGA ATGGCCGGAC ATGCGCGTGC GGCTCGCGTC GGTCACGGAC CATTGGGCGA CCTTCGCCGT GGTCGGTCCG AACAGCCGCA AGGTGCTGCA GAAGGTTTGC CAGGACATCG ACTTCGCCAA CGCGGCGTTC CCGTTCATGA GCTATCGCGA AGGCACGGTC GCGGGCGCCG CGTCGCGTGT GATGCGCATC AGCTTCTCGG GCGAGCTCGC CTATGAGGTG AACGTGCCGG CGAACGTCGG ACGCGCGGTG TGGGAAGCGC TGATGGCCGC GGGCGCGGAA TTCGACATCA CGCCGTACGG CACCGAAACC ATGCACGTGC TGCGCGCGGA GAAGGGCTAC ATCATCGTCG GCCAGGATAC GGACGGTTCG ATGACGCCGT ACGACCTCGG CATGGGCGGG CTGGTTGCCA AGTCCAAGGA CTTTCTCGGC AAGCGTTCGC TGACCCGCTC GGACACGGCG AAGGCAGGAC GCAAGCAACT GGTCGGCCTG CTTTCGGACG ACCCGTCGTT CGTGATACCC GAAGGCTCGC AGATCGTCGC GGGTCCGTTC CAGGGCGACA CGGCGCCGAT GCTCGGCCAC GTCACGTCGA GCTACTACAG CCCGATCCTG AAGCGCTCGA TCGCGATGGC GGTCGTGAAG GGCGGTCTCG ACAAGATCGG CGAGACGGTC ACGATTCCGC TTGCGAGCGG CAAACAGATT GCAGCGAAGG TCACCAGTTC GGTGTTCTAC GACAGCGAAG GAGCACGTCA ACATGTGGAA TGA
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Protein sequence | MSQKDRLPNG GRINRAMPLT FTFNGRQYQG YQGDTLASAL LANGEHFVAR SWKYHRPRGI VTAGVEEPNA VVQLETGAYT VPNARATEVE LYQGLVATSV NAKPSIEKDR MAVNQKIARF IPAGFYYKTF MWPRKFWPKY EEVIRDAAGL GKAPEHTDAD RYDKCFAHCD VLVVGGGPTG LATAHAAALS GARVTLVDDQ PELGGSLLSC RAEIDGKPAL NWVHKIEDEL RQMPDVKILC RSTAFGYQDH NLVTVTQRLT EHLPVSQRKG TRELMWKIRA KRVILATGAH ERPIVFGNND LPGVMLASAV STYLHRYAVL PGRNAVVFTN NDDGYQCALD LKAAGAQVTV VDPRAGESKG TLPALARRYG VKVMSGTVIT AAHGKLRVAS VELASYSNGQ VGAKQGELSC DLLAMSGGWS PVLHLFAQSG GKAHWHDGKA CFVPGKAMQA ETSVGACAGD FTLGQGIRFA VDAGVEAARA AGFIVARPNP VQVAEITEAT MLPLWLVGGR ELATRGPKQF VDFQNDVSAA DIFLAAREGF ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AQALGKTIPE TGTTTFRPNY TPVSFGTFAG RELGEFLDPV RKTAVHEWHV ENGAAFEDVG NWKRPWYYPK AGEDLHAAVA RESLAVRTSV GILDASTLGK IDIQGPDSAK LLNWVYTNPW SKLEVGKCRY GLMLDENGMI FDDGVTVRLA DQHYMMTTTT GGAARVLTWL ERWLQTEWPD MRVRLASVTD HWATFAVVGP NSRKVLQKVC QDIDFANAAF PFMSYREGTV AGAASRVMRI SFSGELAYEV NVPANVGRAV WEALMAAGAE FDITPYGTET MHVLRAEKGY IIVGQDTDGS MTPYDLGMGG LVAKSKDFLG KRSLTRSDTA KAGRKQLVGL LSDDPSFVIP EGSQIVAGPF QGDTAPMLGH VTSSYYSPIL KRSIAMAVVK GGLDKIGETV TIPLASGKQI AAKVTSSVFY DSEGARQHVE
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