Gene Bxe_B1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1576 
Symbol 
ID4007935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1632462 
End bp1633319 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content61% 
IMG OID637951118 
ProductABC proline/glycine betaine transporter, periplasmic ligand binding protein 
Protein accessionYP_553738 
Protein GI91778530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.782004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGA TCAGAAAGAT ATTCGTGTTG AGCGCTTTGA GCGCGGCGCT GGCGGCAAGC 
AGCGTGAGCG TGTCGGCTGA TACCAGGCCG ACCATCAAGA TCGGTTACGT GGAAGGTTGG
GACGATAGCG TCGCGACCTC GAACGTGGCG GCGCGCGTGA TCGAAAAACG CCTCGGCTAC
CAGGTGCAAC TCGTGCCGGT CGCGGCCGGC GTGATGTGGC AGGGCGTGGC GCGCGGCGAC
CTCGACGCGA CGCTGTCCGC GTGGCTGCCG GTTACGCACG GCGCGTACTG GAACAACTTC
AAGGACAAGG TGGTCGACCT CGGTCCGAAC TTCAACGACG CCAAGATCGG CCTGATCGTG
CCGGATAACG CCGACGTGAA GAGCGTGGGC GATCTGGAGG CGAAGAAAAC CGAGTTCGGC
GGCCGTATTG TCGGTATCGA CGCCGGTGCT GGCGTGATGC AGAAAACCAG CGAGGCGATC
AAGGCCTATG GACTCGACTA CACGCTGATG CCGAGTTCGG GCAGCGCGAT GACCGCTGAA
CTGGCGCGTT CGGAAGCGGC GAGCAAGCCG ATTATCGTCA CGGGCTGGAA ACCGCACTGG
ATGTTCGCGA AGTACAAGCT CAAATTCCTC GACGATCCGA AGAAAGTGTT CGGTGAAGCG
GAGCATGTGG ATAGCGTCGT GAACCCCGAA CTGGAGAAGA AGGCGCCGCC GGTCGTCGCG
TTTCTCAAGA AATTCCAGTG GAAGCCGGGC GAAATCGACA GCGTGATGCT GGCGACACAA
AACGGTGAGA AGCCGACCGC CGCCGCCGAT GCGTGGATCA GCGCGCATGG TGATCGCGTG
GATAGCTGGG TGAAATGA
 
Protein sequence
MRLIRKIFVL SALSAALAAS SVSVSADTRP TIKIGYVEGW DDSVATSNVA ARVIEKRLGY 
QVQLVPVAAG VMWQGVARGD LDATLSAWLP VTHGAYWNNF KDKVVDLGPN FNDAKIGLIV
PDNADVKSVG DLEAKKTEFG GRIVGIDAGA GVMQKTSEAI KAYGLDYTLM PSSGSAMTAE
LARSEAASKP IIVTGWKPHW MFAKYKLKFL DDPKKVFGEA EHVDSVVNPE LEKKAPPVVA
FLKKFQWKPG EIDSVMLATQ NGEKPTAAAD AWISAHGDRV DSWVK