| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1552 |
|---|
| Symbol | |
|---|
| ID | 4007959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1654906 |
|---|
| End bp | 1656954 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951142 |
|---|
| Product | cysteine desulphurases, SufS |
|---|
| Protein accession | YP_553762 |
|---|
| Protein GI | 91778554 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGCG TGCTGCCGCA CGATGTGCCG ACCGCTCCGC CTGGCGGCGT GCCTGCGGGA
TTGCCTGATC CCGCAACGCT AACTTCGCTG GCGAATGCGT TCTTCTCGGC ATTGCCGGGC
AATGCGCCGC AGTCAGGCGC GACGCCCGGG CTGGCCGGCA CGCTGCCGTT CACGGCGCCG
GCGACCAGCG AGATCAGCAA TCCGGCGCCG GCGGGTTCGC CGCTCGCGGG CCCTGGCGGC
ACGGGTACGG GCGTGCCCGG CGCGGCGTTG CCGCAAGGGC ATGTGCCCGG TGCCAACCTG
CTGCCTTCGT CGCCGATGCA TGTTCTCGCG CTGGGCAACC GCGCGCCTGC GCTCGCGCCG
CATGCAACAG CGCAGAACGG CTTGCCCGAT AGCGTCGTGA CCATCGCGCC CGCACTCGAT
CCGCGCTTTG GCGGAGCCGC GTTGGGTGTG CCGGAGGCAC ACGGCGCGCA GCGTCCGTCC
GCCGGTGGTG CTGCGCCGCT TGCGCCCGCT GCGCCGGTCT CATCGGCATC CACATCGCCG
TTCTATTTCC TGGGCGAATC GGGCCAGCCT CACTCCGCGA CAACCGCGTC ACCGGATATC
GTCGTGCCGG TCTGGAGCGA GGTGAGTGCG CAATCGTTCG GTCTGCCGGG TGTCGATCAG
CCTCTTGCCG AACAACGTTT CCCCTATGAC CGTCCTGCTG CCCCGCATGC GGCGGCGCCG
TCGAAGCCCG CGGAACACAC GGGCGGCTCG CACTATTTCC TGAATCTGGG CGAGCCGTCA
CGTTCCCCAG GCCACGCGCA CGGCGTGCCG CATGCCGGCC CGTCCGCGCA TCCGCCGTTC
GATGTGAATG CGATTCGCCG CGACTTCCCG ATTCTGCAGG AGCGTGTCAA CGGCCGCCAG
CTGGTGTGGT TCGACAATGC CGCGACCACG CAGAAACCGC AGGCGGTGAT CGACCGGCTG
GCGTATTTCT ACGCGCATGA AAACTCGAAC ATCCATCGGG CGGCTCATGC GCTGGCCGGC
CGCGCCACCG ACGCGTACGA AGCCGCGCGC AGCAAAGTGC AGCGGTTCAT CGGCGCGGGC
TCGCCGGAGG AAATCATCTT CGTGCGCGGC ACCACCGAAG CGATCAACCT GATCGCGAAG
ACGTGGGGCG TGAAGCATGT GGGCGAGGGC GACGAGATCA TCGTCTCGCA CCTCGAACAT
CATGCCAACA TCGTGCCGTG GCAGCAGCTT GCCGCGCAAA CCGGCGCGAA GCTGCGCGTG
ATTCCGGTCG ACGACAGCGG CCAGGTGCTG CTCGACGAAT ACCGGAAGCT TCTGAACGAC
CGCACGAAGA TAGTCTCCGT CACGCAGGTG TCGAACGCGC TCGGGACGGT GGTGCCGGTC
AAGGAGATCG TCGAACTGGC GCATCGCGCG GGTGCAAAGG CGCTGGTCGA CGGGGCGCAG
TCGGTGTCGC ACATGCGGGT GGATGTTCAA GCGCTCGACG CGGACTTCTT CGTGTTCTCG
GGTCACAAGG TGTTCGGTCC AACCGGCATC GGCGTGGTCT ACGGCAAGCG CGCGATTCTG
GAGGACATGC CGCCGTGGCA GGGTGGGGGC AACATGATCG CGGACGTCAC TTTCGAGCGC
ACGCTTTTCC AGCCGCCGCC GAGTCGTTTC GAAGCCGGTA CCGGCAATAT CGCCGATGCA
GTAGGTCTTG GCGCGGCCAT CGATTACGTC CAACGCGTCG GCATCGAGAA TATCGCGCGC
TACGAGCACG ATCTGCTCGC GTATGCGACG AGCGTGCTGC AACCGGTGCC CGGTGTACGT
CTGATCGGCA CGGCACGCGA CAAGGCGAGC GTCCTGTCCT TCGTGCTGGA GGGCTACGAG
ACCGAGGAAG TGGGTCAGGC GCTCAACGAA GAGGGCATTG CCGTGCGCTC GGGGCATCAC
TGTGCGCAGC CGATCTTGCG GCGCTTTGGT CTCGAAGCGA CCGTGAGGCC GTCGCTCGCG
TTCTATAACA CCTGCGATGA AGTCGACGCG CTGGTGTCCG TAGTGCGACG ATTGTCTTCA
CGCCGCTGA
|
|---|
| Protein sequence | MESVLPHDVP TAPPGGVPAG LPDPATLTSL ANAFFSALPG NAPQSGATPG LAGTLPFTAP
ATSEISNPAP AGSPLAGPGG TGTGVPGAAL PQGHVPGANL LPSSPMHVLA LGNRAPALAP
HATAQNGLPD SVVTIAPALD PRFGGAALGV PEAHGAQRPS AGGAAPLAPA APVSSASTSP
FYFLGESGQP HSATTASPDI VVPVWSEVSA QSFGLPGVDQ PLAEQRFPYD RPAAPHAAAP
SKPAEHTGGS HYFLNLGEPS RSPGHAHGVP HAGPSAHPPF DVNAIRRDFP ILQERVNGRQ
LVWFDNAATT QKPQAVIDRL AYFYAHENSN IHRAAHALAG RATDAYEAAR SKVQRFIGAG
SPEEIIFVRG TTEAINLIAK TWGVKHVGEG DEIIVSHLEH HANIVPWQQL AAQTGAKLRV
IPVDDSGQVL LDEYRKLLND RTKIVSVTQV SNALGTVVPV KEIVELAHRA GAKALVDGAQ
SVSHMRVDVQ ALDADFFVFS GHKVFGPTGI GVVYGKRAIL EDMPPWQGGG NMIADVTFER
TLFQPPPSRF EAGTGNIADA VGLGAAIDYV QRVGIENIAR YEHDLLAYAT SVLQPVPGVR
LIGTARDKAS VLSFVLEGYE TEEVGQALNE EGIAVRSGHH CAQPILRRFG LEATVRPSLA
FYNTCDEVDA LVSVVRRLSS RR
|
|---|
| |