| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1544 |
|---|
| Symbol | |
|---|
| ID | 4007967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1664196 |
|---|
| End bp | 1665458 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637951150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_553770 |
|---|
| Protein GI | 91778562 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.86549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG ATCTTTCTCC CGCGGCTAGC GGCAGCGCCG CGCCGGCCGT CCTGCCCCGC
GAACTGCGTT CGCTACCCAC ACCCGAGCTG ATCGCAGACG ACGCGCAGGC GCTTCTCGCC
GCACGGCGTC TCGCCGAGGC GTTCGCACCG GACGCTGCGC TGCGCGATCG CGAACGGCGG
CTTCCGTGGG CCGAGCTCGA CGCGTTCGTG GCGAGCGGCC TGTGGGGCAT CACCGTGCCG
CGCGAATTCG GCGGCGCGGG TGTGAGCAAC GGCACGCTCG CGGAAGTCAC CGCGACGATC
GCGGCGGCCG ACGGCTCGCT CGGCCAGATC CCGCAAAACC ATTTCTATGC ACTGGAGGTG
TTGCGCGTCG GCGGCAGCGT CGAACAGCAG CGCTTTTTCT ACGGACGCGT ACTCGCCGGC
GAGCGTTTCG GCAACGCGCT CGCCGAAATC GGCCACAAGG ATTTCAAACG CCGCACACGG
CTCACGCGCG AGGCGGCCGG CTGGCATATC GACGGCCGCA AGTTCTATTG CACGGGCGCG
CTATACGCCC ACTGGATTCC CACGCTAGTC GTGGCCGAAG AGCAGGGCCG CGACGTCACC
TATCTGGCGT TCGTGCCGCG CGACACACCA GGCGTTACCG TAACGGACGA CTGGGATGGC
TTCGGCCAGC GCGTCACCGG CAGCGGGTCG GTGCAGTTCG ATTACGTGCG CGTCGAGCCC
GAATGGGTCG TGCCGTTTCA GGCGTCGTTC GAGCGCCCCA CAACGATCGG ACCGCTTGCG
CAGATCATTC ACGCGGCGAT CGATCTGGGT CAGGCGCGTG GCGCGTTCGA AGCCGGCCTG
AAGTTCGTGC GGGAACGCTC GCGCCCGTGG ATCGACGCGA AGGTGGAACG TGCCGCCGAC
GATCCGCTGA CCCTTGCGCA GTTCGGCGAC ATCTCGGTGC GGCTGCGTGC GGCGGAAGCG
TTGCTGCGCC GCGCGGGCCG CTTCGTCGAC GCGGCGCAGG CGCAGCTCAC AGAGCAGTCG
GTGGCGCAGG CATCGATTGC CGTGGCCGAG GCGCGCGCGC TCACCACCAC CGCATCGCTG
GATGCCGGCT CGCGTCTGTT CGAACTCGCC GGCACCGCCG CCACGCTCGA CGGTCTCGGC
CTCGACCGCT TCTGGCGCAA CGCCCGCACT CATACGTTGC ACGACCCGGT GCGCTGGAAG
TATCACGCCG TGGGCAACTT CTACCTCAAC GACAAGCTGC CGCCGCGGCA TGGAGCCTTG
TGA
|
|---|
| Protein sequence | MTIDLSPAAS GSAAPAVLPR ELRSLPTPEL IADDAQALLA ARRLAEAFAP DAALRDRERR
LPWAELDAFV ASGLWGITVP REFGGAGVSN GTLAEVTATI AAADGSLGQI PQNHFYALEV
LRVGGSVEQQ RFFYGRVLAG ERFGNALAEI GHKDFKRRTR LTREAAGWHI DGRKFYCTGA
LYAHWIPTLV VAEEQGRDVT YLAFVPRDTP GVTVTDDWDG FGQRVTGSGS VQFDYVRVEP
EWVVPFQASF ERPTTIGPLA QIIHAAIDLG QARGAFEAGL KFVRERSRPW IDAKVERAAD
DPLTLAQFGD ISVRLRAAEA LLRRAGRFVD AAQAQLTEQS VAQASIAVAE ARALTTTASL
DAGSRLFELA GTAATLDGLG LDRFWRNART HTLHDPVRWK YHAVGNFYLN DKLPPRHGAL
|
|---|
| |