Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1495 |
Symbol | |
ID | 4008016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1733593 |
End bp | 1735209 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637951199 |
Product | ABC peptide transporter, periplasmic ligand binding protein |
Protein accession | YP_553819 |
Protein GI | 91778611 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.045715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00127227 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAAGG AAAACTCGCA ACATGGCGCT CTTGGACTCG GAAGCGAGTT GGAGCGGCTG ACGGCCAAAG GTGCCTCGCG GCGCGGCGTG CTGCGCGCGA TGGCCGCAGC CGGGATGATG TCGGTGACGG GCGCCGGTCT TCTGACCGCT AGCGGTGAGG CCCTGGCGCA AGCCAGGCCG AAGCAGGGCG GCAAGATCCG TGTGGCGACA CAGTCCGCTT CCGCGGCCGA CACGCTCGAT CCCGCGAAAG GCGCGCTCGG CACCGACTAC GTTCGTGGCT TCATGTTCTA CAACTGCCTG ACCGAACTCG ATTCGCATCT CGGCGCGAAG ATGTCGCTCG CCACCTCGCT CGACACGAAA GACGCCACCG TGTGGGTCGT CAAGCTGCGC AACGGCGTGC AGTTCCACGA CGGCAAAGCC CTTGCGCCCG CCGACGTGGT GTACTCGATC ATGCGCCACA AAGACCCGGC CACCGCCTCG AAAGCGAAGA CGCTGGCCGA TCAGATCAAG GAAGTGAAGG CCACCGGCCC GAACGAAGTG ACGATCACGC TGGAAGGCCC GAATGCCGAT CTGCCCGTGA TCCTCGCCAC CTCGCATTTC CAGATCATCA AGGACGGCAC CAAAGATTTC AAAACGGCGA TCGGCACCGG CCCGTTCAAG CTCAAGGAAT TCTCGCCGGG CGTGCGCACG GTCGGTGTGA GAAACGAGAA GTACTGGAAG CCGGGCATGC CGCACCTCGA CGAAATCGAA CTGATCGGCA TCGGCGACGA ATCGGCGCGC GTGAACGCGC TGCTTTCGGG CGACGTGCAG TTGATCAACG CGGTAAGCCC GCGTTCGACG ACCCAGATCA AGGGCGCCGG CGGTTTCTCC GTGCTGGAGA CGAAGACCGG TCTGTACACC GACCTGGTGG TGCGCGACGA AGGCGGCATT ACCGGCAACG ACGATTTTCG CCGCGGCATG ATGTACCTGC AGGACCGCGA GCAGATGCGC CGCGCGATCT TCCAGGGTTA CGGCACGATC GGCAACGACC AGCCTATCGA CCCGACCAAC AAGTACTACC TGGCCGGCTT GCCGCAGCGT ACCTTCGATC CGGACAAGGC GAAGTTCCAT TTCCAGAAGG CGAAGGTCGG CAGCGCGCCG ATCCAGATTT TCGCCTCGCC GGCGGCCGAA GGCTCCGTTG AAATGGCCAT GTTCCTGCAG CAGGTCGCGC CGCAAGCCGG TCTGAATCTG CAGGTCTCGC GCGTGCCGGC CGACGGCTAC TGGTCGAACC ACTGGATGAA GCATCCGCTG GGCTTCGGCA ACGTCAACGC GCGTCCGAGC GCCGACGTGA TCTTCACGCA GTTCTTCAAG TCGGACGCAC CGTGGAACGA AGCGAACTGG AAAAGCCCGA AGTTCGACCA GTTGCTGCTT CAGGCGCGCG GCGAACCGGA CGACGCCAAA CGCAAGAAGA TCTACGGCGA CATGCAGGTG CTGGTGCATG AAACCGGCGG TGTCGGCATT CCTCTCTTTC AGAGTTCGCT CGACGCGTAT ACGGACAAGC TCAAGGGCCT CGGCTCGATT CCGCTCGCCG GGCTGATGGG CTTCATGTTC GCGGAAAACG TCTGGCTCGA AACCTGA
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Protein sequence | MNKENSQHGA LGLGSELERL TAKGASRRGV LRAMAAAGMM SVTGAGLLTA SGEALAQARP KQGGKIRVAT QSASAADTLD PAKGALGTDY VRGFMFYNCL TELDSHLGAK MSLATSLDTK DATVWVVKLR NGVQFHDGKA LAPADVVYSI MRHKDPATAS KAKTLADQIK EVKATGPNEV TITLEGPNAD LPVILATSHF QIIKDGTKDF KTAIGTGPFK LKEFSPGVRT VGVRNEKYWK PGMPHLDEIE LIGIGDESAR VNALLSGDVQ LINAVSPRST TQIKGAGGFS VLETKTGLYT DLVVRDEGGI TGNDDFRRGM MYLQDREQMR RAIFQGYGTI GNDQPIDPTN KYYLAGLPQR TFDPDKAKFH FQKAKVGSAP IQIFASPAAE GSVEMAMFLQ QVAPQAGLNL QVSRVPADGY WSNHWMKHPL GFGNVNARPS ADVIFTQFFK SDAPWNEANW KSPKFDQLLL QARGEPDDAK RKKIYGDMQV LVHETGGVGI PLFQSSLDAY TDKLKGLGSI PLAGLMGFMF AENVWLET
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