| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1445 |
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| Symbol | |
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| ID | 4008066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1776765 |
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| End bp | 1778483 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951249 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_553869 |
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| Protein GI | 91778661 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0161309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA TCCAGGCAAC CGTCGCCCGG CAAGCGCTGG ACAGCGTCTA TGAGGTGAGC
AAGACGCTGG TTTCGTCGCT CGATGTGGCG AAAACCTTCC GCGAATCCCT GAACTATCTG
CTGCACACAA TGGAGTGGCG ACGCGCCTTT GTGGTGCTGG CCGAACCCGA CGGGCAGTTG
CGCGGCCTGT GCGCCGCGGG TCTTTCGCGC GACGAACAGC AGCGTTTGCA GTTTCGTCCA
GGGGAAGGCA TCGTGGGCCG CGCGTTCAAG AGCGGTATCG GCGTGATCGT ACCGGACGTG
AACGACGAGC CGGTGTTCCT GAATCGCACC GGCGGCGCGG ACCAGATGCC GGGGGCGTGC
ATCGCCATGC TCGCGACGCC GATCCATGCC GACCGGCGCA CGCTGGGTGT ACTCGCCGTG
GATTGCGTGA ATCCTGGCGC GAGCCGCCTA TTCGCCGACG ACCTGCATCT GATGAAGATC
GTCGCCACAC TGATGGGGCA GGCGTTGCTG CTTCAGCGCA GCGTCAGCGC CGCGCACGAC
AGCATGCAGG ATGAAGTCAG ACGTATGCAG AAGGCGATCA AACCGAGCCA GCAGATCGAT
CAGGTGGTCG GCGTTTCGGC CGCCATGCAG GCGGTGTTCG GCCAGGTGCG CCAGGTCGCG
CCGGCGCGGA CCACGGTGCT GCTGCGCGGC GAGAGCGGCA CCGGCAAGGA AGTGATCGCG
CGCGCGATCC ACAATCTGTC GCCGCGCAGC GGCGATTCGT TCGTGCGGGT CAATTGCGCG
GCGCTGACAG AATCTCTTCT GGAGAGCGAA CTGTTCGGTC ACGAGAAGGG GGCGTTCACC
GGCGCGCAGG GACAGCGCAA GGGCCGCTTC GAACTGGCGC ACGGCGGCAC GCTGTTTCTC
GATGAAATCG GCGACATCTC GCCGTCGTTT CAGGCCAAGC TGTTGCGTGT GCTGCAGGAG
CGCGAGTTCG AACGTGTCGG CGGTACGACG CCGGTGAAGG TCGATGTGCG TCTGATTCTC
GCCACCAACC GCAACCTCGA ACGGATGGTG AAGGCCGGCG AATTTCGCGC GGATCTCTAC
TACCGCATCA ACGTGGTCAG CATCGAATTG CCGCCGCTGC GCGAGCGGCG CGAAGATATT
CCGGCGATGG CGCAGCACTT TCTCGCCCGT TTCAACCGCG AGAACGCGCA GTCGATCCGC
TTCGACGCCG AAGCAATGCG GGTGCTGACG AACTGCTACT GGCCGGGCAA CGTGCGTGAG
CTGGAGAACT GCGTCGAGCG CACGGCGACC ATGACGCGCG ACGGCGTGAT CGACCGGTTC
AAGTTCCTGT GCCAGGAAGA TCGCTGCCTG ACGAAGGTGC TGCACTACAT CGAGCGCGAA
GATGCCGTGC GTCCCGCGCG CCTCGCCGAT ATTCCGATCG CCGAAGTGTC GTCGTCGCAG
CCGCCGTATG GTCATCATGA TCTGGATGCG CCGTCGGCGC CGGCTGCCTG GTCCGGCGGC
ACGGACCCGG ACGCCGAGAC CGAACTGGAT CCGGCGGCCG ACGAGCGCGC ATTTGCGGCA
GCGTCGGCCG GTAAGCCGGA AGGCGAACGC GAGCGTTTGA TCTGGGCGAT GGAACGTTGC
GGCTGGGTGC AGGCGAAGGC GGCGCGGCTG CTGGGCATCA CGCCCCGGCA AATGGGCTAC
GCGCTGCATA AATACGCTAT TGAGGTTCGC AGGTTCTGA
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| Protein sequence | MLNIQATVAR QALDSVYEVS KTLVSSLDVA KTFRESLNYL LHTMEWRRAF VVLAEPDGQL
RGLCAAGLSR DEQQRLQFRP GEGIVGRAFK SGIGVIVPDV NDEPVFLNRT GGADQMPGAC
IAMLATPIHA DRRTLGVLAV DCVNPGASRL FADDLHLMKI VATLMGQALL LQRSVSAAHD
SMQDEVRRMQ KAIKPSQQID QVVGVSAAMQ AVFGQVRQVA PARTTVLLRG ESGTGKEVIA
RAIHNLSPRS GDSFVRVNCA ALTESLLESE LFGHEKGAFT GAQGQRKGRF ELAHGGTLFL
DEIGDISPSF QAKLLRVLQE REFERVGGTT PVKVDVRLIL ATNRNLERMV KAGEFRADLY
YRINVVSIEL PPLRERREDI PAMAQHFLAR FNRENAQSIR FDAEAMRVLT NCYWPGNVRE
LENCVERTAT MTRDGVIDRF KFLCQEDRCL TKVLHYIERE DAVRPARLAD IPIAEVSSSQ
PPYGHHDLDA PSAPAAWSGG TDPDAETELD PAADERAFAA ASAGKPEGER ERLIWAMERC
GWVQAKAARL LGITPRQMGY ALHKYAIEVR RF
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