Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1325 |
Symbol | |
ID | 4008186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1903241 |
End bp | 1904884 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951367 |
Product | major facilitator superfamily efflux pump outer membrane lipoprotein |
Protein accession | YP_553987 |
Protein GI | 91778779 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.324666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0263416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGCC CGCTTGTGAA TTCGCCGTGG TTGACTGCCC GCTTTTCTCC GCTGTCCACA CTATCCACGC TGTCCGTTGC GATGCTGCTC GCCGCGTGCG CGGTCGGCCC CGACTTTCAC GCGCCGAAAG CGGACGTGCC TGACCAATGG CGCGACCCGC AACGCAGCGC GGCGATTGCC ACGGGCGCAT CCGCCGCGAA CGTCGCCTCA GTCCCCACGC TCGATACCGA TCCCGATCCC CGCTGGTGGC GCAATTTCAA CGACCCGACG CTGGACGCGC TGATCGGGCG TGCCGCGCGC GGCAACCTGG ATTTGCAGGA GGCGGTGCTG CGCATTGTCG AAGCGCGCAC TCAGGTACAA AGCGCCGCGT CCCAAGGTCT GCCGAACGTG CGGGCAACCG GCAGTTACCA GCGCGAACAG CTCGGCGTGA AAGGCTTCCT CGAATCCGAC GGCGTATACG GCAAGGTCGA TCAGCTCGGC GCGCCGAACT CGCCGGTCAA CGCTATCGCA CCGGGTGCGG GTGCTACGTT GCAAAACGGC GCGAACAACC TGCTGAATCA ATTGACCGCG CCGGTCAATC TCTGGCAGGC CGGCTTCGAC GCCTCGTGGG AACTGGATCT GTTCGGCCGC GTGCGCCGCT CGGTGGAGGC TGCCAATGCG CAAACCGAAG CCGCCGTGGA AAGCCGCAAC GACGCGCTGC TCTCGCTCGA AGCCGAAGTC GCGCAGACGT ATATGCAATT GCGCGGCGCA CAGGCATTGC ACGCCATTAC GGCGAGTCTC GTCGACGAAC AGCGCGAGAT CGTCACGTTG ACGCAAAGCC AGGCGAAAGT CGGCCTGACG AGCGAACTCG ACGTGAAGAG CGCGACGGCG CAACTGGCGC AAACCCAGGC ACAGTTGCCG CAGTACGAGC AGCAGATTGC CCAGGCGTTG AACGGTCTCG CGTATCTGGT GGGCGAAGCG CCCGGCGCAC TGGAAGTCGA ACTCGCCGCG CCGGCCGCCG TGCCGCCCGT GCCGCCTGTC GTGCCGGTGG GTTTGCCGTC CACGCTGGCG CGCCGGCGTC CCGACATTCG CCGCGCGGAG GCGAGCCTGC ATTCGGCCAC GGCCAATGTC GGCGTGGCCG TGGCGCAGTT CTATCCCGAC GTGTCCCTGA CTGGCCAGGT GGGAACGCGG GCCACCAATG CGAGCGATCT GTCGCGCTGG TCGCATCTGT TCTATTCGTT CGGACCGAGC ATTTCGTTGC CCATTTTTCA GGGCGGCGCG CTGGTGTCCA ATTTGCGCCT GTCGAAAGCG CAGGAAGCCG AAGCAGCGCT CGACTACCGG AAGACGGTAT TGATGGCGCT GCGCGACGTG GATAACGCGC TCACGGTGTA CCGCACCGAT CAGGCGCGGC GCGACTCGCT CGGCGAGAGC GTCGCTGCGG AACAGGCGGC GTTCGATCTC GCACGCGACA GTTACCGCAA GGGGATTACG AGCTTCATCA ATGTGCTGGA TGCAGAGCGG CAATTGGCGC AGGCCCGCCA GCAATATGCG CAGGGAACCA TGCAGGTGAG CACCGACCTG GTGTCTTTAT ACAAGGCGCT TGGCGGCGGC TGGCAGAGTG ACGCGGATGC ATCGGCAGCG CCTCGCGCGC GTCAGGGAGG ATAA
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Protein sequence | MRRPLVNSPW LTARFSPLST LSTLSVAMLL AACAVGPDFH APKADVPDQW RDPQRSAAIA TGASAANVAS VPTLDTDPDP RWWRNFNDPT LDALIGRAAR GNLDLQEAVL RIVEARTQVQ SAASQGLPNV RATGSYQREQ LGVKGFLESD GVYGKVDQLG APNSPVNAIA PGAGATLQNG ANNLLNQLTA PVNLWQAGFD ASWELDLFGR VRRSVEAANA QTEAAVESRN DALLSLEAEV AQTYMQLRGA QALHAITASL VDEQREIVTL TQSQAKVGLT SELDVKSATA QLAQTQAQLP QYEQQIAQAL NGLAYLVGEA PGALEVELAA PAAVPPVPPV VPVGLPSTLA RRRPDIRRAE ASLHSATANV GVAVAQFYPD VSLTGQVGTR ATNASDLSRW SHLFYSFGPS ISLPIFQGGA LVSNLRLSKA QEAEAALDYR KTVLMALRDV DNALTVYRTD QARRDSLGES VAAEQAAFDL ARDSYRKGIT SFINVLDAER QLAQARQQYA QGTMQVSTDL VSLYKALGGG WQSDADASAA PRARQGG
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