Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1309 |
Symbol | |
ID | 4008202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1925250 |
End bp | 1927334 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637951383 |
Product | transketolase |
Protein accession | YP_554003 |
Protein GI | 91778795 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.369014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.106663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG ATCCCGCCCT CGACCAGCTG TGTATCAACA CGATCCGCAC GCTGTCGATG GACGCTGTGC AAAAGGCCAA TTCCGGTCAC CCCGGTACGC CGATGGCACT GGCACCCGTT GCCTATCACC TGTGGCAAAA CCATCTGCGC TACGACCCCG ACGAGCCGCT CTGGCCTGAT CGCGACCGCT TCGTCTTATC CGTGGGACAC GCGTCGATGC TGCTGTATTC GCTGTTGCAC CTTGCAAACG TGAAAGCCGT GGACGACGAC GGCAACCCGA CCGACGGACC CGCAGTTTCG CTCGACGATA TCGAACATTT CCGCCAGATG GGCAGCAAGA CACCGGGCCA CCCGGAGTAC CGCATGACCA CCGGCGTCGA GACCACCACG GGCCCGCTTG GGCAAGGGCT CGGCAATAGC GTTGGCATGG CGATGGCGGC GCGCTGGTAC GAGAGCCATT TCAACAAGCC CGATGCGCCG CTGTTCGACT ATCGGGTCTA CGCGTTGTGC GGCGACGGCG ACATGATGGA AGGCATCTCG CACGAGGCGG CTTCGCTCGC CGGCCACCTG AAGCTGTCCA ATCTGATCTG GATCTACGAC AGCAACCGCG TGACGATTGA AGGCCACACC GACCTCGCTT ATAGCGACGA CGTGGAAACC CGCTTTCGCG GGTACAACTG GCACACGCTG CATGTGAGCG ATGCAAACGA CGCCGCCGCG CTGGAAGCGG CATTCGTCGA AGCGAAAAGC ATTACCGACA GGCCGACGCT GATCGTGGTG CACAGCATCA TCGGCTGGGG GGCGCCGCAT AAGCAGGACA CCTCGGCGGC GCACGGCGAG CCGCTCGGCG TAGAAGAAGT GGCGCTCGCC AAGAAAGCGT ACGGCTGGCC CGAGGATAAA TTCTTCTATG TGCCGGACGG TGTGCACGAA CGCTTCGCGG CGGGCATCGG CGCGCGCGGC AAGGCGGCGC GCGAGGAATG GCAGGCGAAG TACGACGCCT ACAGCAGAAA GTACCCCGAA CTCGCGCGTG AATTCGCGCA GATCGAAGCG CACGAATTGC CGGCCGGTTG GGACAGCGAC ATTCCCACCT TCGACGCGGA CCCGAAAGGC GTTGCGTCAC GCGAATCGTC GGGCAAGGTG CTCAATGCGA TTGCCGCGCG CGTTCCGTGG ATGATCGGCG GCGCGGCCGA CCTTTCGCCG TCCACCAAAA CGAATCTGAA ATTCGAGGGC GCGGGCAGCT TCGAATACGA CAACTACGGC GGCTGCAATC TGCATTTCGG CATTCGCGAA CACGCAATGG GCGCGGCGGT GAATGGCCTC GCGCTGTCGA ATCTGCGGCC GTTCGGCTCG ACCTTCCTGA TTTTCAGCGA CTATATGAAG CCGCCGATCC GCCTCTCGGC GATCATGGAA GTGCCGGCCA TCTACGTGTT CACGCACGAT TCGATCGGCG TCGGCGAAGA CGGTCCGACC CATCAGCCAA TCGAGCAGCT GGCCTCGCTG CGCGGCGTGC CGGGGCTGAC CGTGCTGCGT CCGGGCGACG CCAACGAAGT GGCCGAGGCG TGGCGCGTGG CGCTTGCCGA TCCGCGGCGG CCGTCGTGCA TCGTGGTGTC GCGCCAGCCG TTGCCCACGC TGGACCGCAG CCGCTATGCG GCCGCGAAGG GCACGCAGAA GGGCGCCTAT GTGCTCGCCG ATGCAGCCGA CGGGCAAAAG CCGCAGGTGA TCCTGATAGC CACGGGCAGC GAACTCTCGG TCTGCGTCGA CGTGTATGAG AAGCTCACGA GCGAAGGTAT TGCGGCGCGC GTGGTGTCGA TGCCGTCGTG GGATATCTTC GAGCGCCAGG ACGAGGCCTA TCAGGACTCG GTGCTGCCAC CGGATGTGGA CGCGCGCGTG GCGGTCGAGC AGGCGGCCTC GCTTGGCTGG GACCGTTATG TGGGGCGTCT CGGCGCGCAG GTGGTGATGC ATACGTTCGG CGCGTCCGCG CCGCTTGCCG AACTGAAGAA GAAGTTCGGC TTCACGCCGG AGCATGTGTA CGAAGCGGCA AAGCAGCAGA TTGCGCGGGT GCAAGGCAAG CGCAGCCAGG AGTAG
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Protein sequence | MQNDPALDQL CINTIRTLSM DAVQKANSGH PGTPMALAPV AYHLWQNHLR YDPDEPLWPD RDRFVLSVGH ASMLLYSLLH LANVKAVDDD GNPTDGPAVS LDDIEHFRQM GSKTPGHPEY RMTTGVETTT GPLGQGLGNS VGMAMAARWY ESHFNKPDAP LFDYRVYALC GDGDMMEGIS HEAASLAGHL KLSNLIWIYD SNRVTIEGHT DLAYSDDVET RFRGYNWHTL HVSDANDAAA LEAAFVEAKS ITDRPTLIVV HSIIGWGAPH KQDTSAAHGE PLGVEEVALA KKAYGWPEDK FFYVPDGVHE RFAAGIGARG KAAREEWQAK YDAYSRKYPE LAREFAQIEA HELPAGWDSD IPTFDADPKG VASRESSGKV LNAIAARVPW MIGGAADLSP STKTNLKFEG AGSFEYDNYG GCNLHFGIRE HAMGAAVNGL ALSNLRPFGS TFLIFSDYMK PPIRLSAIME VPAIYVFTHD SIGVGEDGPT HQPIEQLASL RGVPGLTVLR PGDANEVAEA WRVALADPRR PSCIVVSRQP LPTLDRSRYA AAKGTQKGAY VLADAADGQK PQVILIATGS ELSVCVDVYE KLTSEGIAAR VVSMPSWDIF ERQDEAYQDS VLPPDVDARV AVEQAASLGW DRYVGRLGAQ VVMHTFGASA PLAELKKKFG FTPEHVYEAA KQQIARVQGK RSQE
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