Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1252 |
Symbol | |
ID | 4008259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1980099 |
End bp | 1981652 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951434 |
Product | major facilitator superfamily multidrug efflux transporter |
Protein accession | YP_554054 |
Protein GI | 91778846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA ACGGCCACGC TGCCCGACGT GCCTTATATC CTGATACCCA CTCCCCGCTC ATGTCCCGCA ACCCGCAATC GTCGCGTCCT CTGGTCATTG CCGCCGTCAT GGCGTCTATG GCGATGGTCG CCATCGAAGC CACCATCGTT TCCACCGCCA TGCCCCAGAT CGTCGCGCAA CTCGGCGACC TGCATCTGTA CAGCTGGGTC TTCTCGTCGT TCCTGCTCAC GCAGACCGCG ATGACCGTGG TCTTCGGCAA GCTCGCCGAT CTGTATGGCC GCAAGCCGGT CATGCTGGCC GGCATCGCGA TCTTTCTGAT CGGCTCGGTG CTGGCCGGCT TCGCCTGGTC GATGCCGGCA ATGATCGCGT TCCGCCTGAT TCAGGGCGTC GGCGCGGGTG CGATCCAGCC GGTCACGCTG ACCATCGTCG CCGATCTCTA TCCCGCACAC GAACGCGGCA AGGTGCAAGG CTACCTCGCG AGCGTATGGG CCATTTCGGC GGTGGTGGGT CCGATGGTCG GCGGCTTCAT CATTCACAAC ATGTCGTGGG CATGGATCTT CTGGATGAAC GTGCCGATCG GGCTCGCCTC CGCGGCGGGC TTCATCGCGT TCCTGCGCGA ATCGGAACGG CATGCGCGCC CGTCGATCGA TTTCGGCGGC GCAACGCTCT TCATGGCGGC GATCGCCGCG CTCATGATGG CGCTGACCTA TGCGGGCGAC GACGAGGTCG CGCGTGCGTC GCTCGCGAGC GGCGCCTTCG TGTTGTGCAT GGTGGCGTTC GTCTGGCAGG AGCGCCGCGC GGCCGAGCCG ATGATCTCCT TCGCGCTGTG GGGCCGCCGG CCGATTGCCG CATGCAATGG CGCGACCCTG CTTGCCGGCA TGATCCTGAT GGGCGCCACC ACGTTTCTGC CCATGTACGT GCAGGGCGTG CTGCATCGCT CGCCGGTGAT CGCCGGCCTG GCGCTGACCA TGATGATGGT GGGCTGGCCG GCCGGCGCCA CGTTCGCGGC GAAGTCGTTC CACCGCTTCG GCTTGCGGCG CATTCTGATT GGCGGCAGCG CGTTCATTCC CATCGGCGCG GTGCTGTTGC TGTTTCTGTC GCCCGGCGGC TCGCCGCTCG TCGCCGCGTT CGGTTCGCTC ATCATGGGCT TCGGCATGGG CACGTCGAGC GTCAGTTCGC TGGTGCTGAT TCAGGAGATC GTCAGAATGG ACGAACGCGG CAGCGCCACC GCGTCGAATC TTTTCTCGCG CAATCTCGGC AGCACGCTGG GCGCGACACT GTTCGGCGCG GTGCTCAATT TCGGACTCAG CCACTCGAAG GGCGTCGCCG TGGTCACGTC GGATCAGTTG AGGGCGTTGC TGCAGAATCA GGCCACCAGT CCCGGCGACG GCGACGTGAT CCGCATGGTG CTGCATCAGT CGCTGCACCT GACGTTTCTC TCGATCTTCG TCATCGGCAT CTTCACGGTC GTGCTCATGG CGCTCGTGCC CGCGATCAGC CTCGGGACCG GAAAGACAAT ACCGCTCGAA ACGCTGTCGC CGATCGAGGA CTGA
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Protein sequence | MAANGHAARR ALYPDTHSPL MSRNPQSSRP LVIAAVMASM AMVAIEATIV STAMPQIVAQ LGDLHLYSWV FSSFLLTQTA MTVVFGKLAD LYGRKPVMLA GIAIFLIGSV LAGFAWSMPA MIAFRLIQGV GAGAIQPVTL TIVADLYPAH ERGKVQGYLA SVWAISAVVG PMVGGFIIHN MSWAWIFWMN VPIGLASAAG FIAFLRESER HARPSIDFGG ATLFMAAIAA LMMALTYAGD DEVARASLAS GAFVLCMVAF VWQERRAAEP MISFALWGRR PIAACNGATL LAGMILMGAT TFLPMYVQGV LHRSPVIAGL ALTMMMVGWP AGATFAAKSF HRFGLRRILI GGSAFIPIGA VLLLFLSPGG SPLVAAFGSL IMGFGMGTSS VSSLVLIQEI VRMDERGSAT ASNLFSRNLG STLGATLFGA VLNFGLSHSK GVAVVTSDQL RALLQNQATS PGDGDVIRMV LHQSLHLTFL SIFVIGIFTV VLMALVPAIS LGTGKTIPLE TLSPIED
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