Gene Bxe_B1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1228 
Symbol 
ID4008283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2013537 
End bp2014700 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content62% 
IMG OID637951458 
ProductOmpC family outer membrane porin 
Protein accessionYP_554078 
Protein GI91778870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.208027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCATTACTGC GACCGCCGTC TCCGCCACTT TTGCGTGCGC GGCGCACGCC 
CAGAGCAGCG TCACGCTATA CGGCATTGTC GATGCCGGCC TGACGTACGT GAGCAATGAA
GTCAGCAAGG ATTCCACCGT AACGTCAGAC GGGCGTGTCA CCGGCGGCAA GGCCATGTTC
GGCATGACCG GCGGCAACAT CCAGCCGAGC CGCTGGGGCC TGCGCGGTGT CGAGGATCTG
GGTGGCGGAC TGAAAACGGT CTTCAACCTG GAAAGCGGGT TCAACATTGC GAACGGCAAT
CAGGCCGTGT CCAACAAGCT GTTCAACCGC CAGGCGTATG TCGGCCTGTC CAATGAGTAC
GGTACGGTTT CGTTCGGCCG CCAGTACGAC TCCGTGGTCG ACTATCTCGC GCCGCTGACA
GCGGCCGGCA GCTGGGGCGG CACGTATTTC GCGCATCCGG GCGACAACGA CAACGCCAAC
TCGTCGATCA GCGTCAACAA TTCGGTCAAG TTCCAGAGCG CGAACTACGC CGGCTTCTCA
ATGAGCGGCC TGTATGGCTT CTCGAACAAT GCGGGCTTCG CCGACAACCG CGCATACAGC
GTCGGCGCGG GTTACCGCAA TGGTGGCTTG CAACTGGGTG CGGCCTATCT CCAGTACCAG
GGCATGGACC TGAATCAGAG CAATGGCGCG GTCAGCGGCG GCACCTTCGC GGCATCCGCG
GTCAGCGGCG TTCAGAATCA GCGCACCTGG GGTCTCGGCG GCAGCTACGC GTTCGGTCCG
TTCATTCTCG GCACCGTCTT TACGCAGAGC CGCTTCCAGG ACAAGTTCTC GGATATCTCG
GTTCGCTACA ACAACTACGA GGTCAATGCG CGCTACAACC TGACGCCGGA ACTGGGTCTG
GGTGCGGCCT ACACGTATAC GCAGGCACTG CGCGCGGCGC CGGGCACCAG CGACACGAAC
ACCGGCGCGG CCCACTGGAA TCAGTTCGGA CTGCAGGCTG ACTACTCGCT GTCGAGGCGT
ACCGACATTT ACGCAGAAGC GGTCACGCAG CTCGGCGCGA ACAATGGTCG CGGGCTGAAT
GCGGTGCAAA TCAACGGTAC CTCCGCACCG TCCACGGCGA GCAACCAGTT TCTCGTGACG
ACGGGCATCC GTCACCGGTT CTGA
 
Protein sequence
MKKIITATAV SATFACAAHA QSSVTLYGIV DAGLTYVSNE VSKDSTVTSD GRVTGGKAMF 
GMTGGNIQPS RWGLRGVEDL GGGLKTVFNL ESGFNIANGN QAVSNKLFNR QAYVGLSNEY
GTVSFGRQYD SVVDYLAPLT AAGSWGGTYF AHPGDNDNAN SSISVNNSVK FQSANYAGFS
MSGLYGFSNN AGFADNRAYS VGAGYRNGGL QLGAAYLQYQ GMDLNQSNGA VSGGTFAASA
VSGVQNQRTW GLGGSYAFGP FILGTVFTQS RFQDKFSDIS VRYNNYEVNA RYNLTPELGL
GAAYTYTQAL RAAPGTSDTN TGAAHWNQFG LQADYSLSRR TDIYAEAVTQ LGANNGRGLN
AVQINGTSAP STASNQFLVT TGIRHRF