| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1041 |
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| Symbol | |
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| ID | 4008470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2215221 |
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| End bp | 2216297 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637951643 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_554263 |
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| Protein GI | 91779055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.000439487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA GCATGAAGAA GGCGACCGTC GGCGTGACTT GCGCCGGGCT CGCCGGGTTT
GCAGCCAGCG CGCACGCGCA ATCGAGCGTG ACCTTGTACG GCATCGTCGA CGCGGGCGTC
GAATACGTGA ACCATGCAAG CAAGGACGGC GGCGCCGCGC GCCTCGTGTC CGGCGGCAAG
AACACTTCGC GCTGGGGTCT GCGCGGCGCG GAGGATCTCG GCGGCGGTCT GAAGGCGGTG
TTCCAGTTGG AAAGCGGCAT CAACATCGCC AACGGCCAGT TCGACGACAG TTCCGGCGCG
ATCTTCGACC GCCGTGCAAC CATCGGCCTG AAAAACCGCT TCGGGCAAAT CACGCTCGGC
CGCAATTTCA CGACCACGTA CGACTACATG TTGCAGTTCG ACCCGATGGG TTACGCGCCG
AACTACTCGT GGGCGACGTC ATCAACGGCG ACGGGCGGCC GCAAGGATGG GCTGTTCTCA
CGCTCGTCCA ACGCGGTGCG TTATGACGGC ACCTTCTCCG GCTTCAAGTT CGGCGCGATG
TACGGTTTCG GCAACGTGCC GGGCAGCATG AAGTCGAGTT CGAAGTACGA CTTCGCTCTT
GGCTACGAGA CCGGTCCGTT CGCCGCGGTC GTGACCTTCG ACCGGCAGAA CGGCGCGAAC
GACAGCGTAA CGCCCGCCGA TACCACCAAC TATATCCAGG GCATTCACGC AGGCCTGAGC
TACGACTTCG GCCCCGTGAA GGCAATGGCC GGTTATCGGA ACTACCAGCG CACGTTCCAC
ACCGCCGCGC CCACTTTGCG CAGCGACATG TACTGGCTCG GCGGTCAATA TGAGGTGACG
CCGTTCATCT CGCTGTTCGC GGCGGTCTAC CATCAGGACA TCAAGGACGC GAGCGACGCC
GATCCGACGC TGTTCTCGCT GCGCGCGCAA TACGCGCTGT CCAAGCGCAC GGTGCTGTAT
ATGGCGGGCG GTTATGCGAT GGCCAGGCAT GACAACGCTG TCAGTCTGTC ACGCGATTTG
ATCGGCGCGG CGGATACGCA AACTGGCGTG ACGGCGGGTA TTCAGCATCG TTTCTGA
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| Protein sequence | MKLSMKKATV GVTCAGLAGF AASAHAQSSV TLYGIVDAGV EYVNHASKDG GAARLVSGGK
NTSRWGLRGA EDLGGGLKAV FQLESGINIA NGQFDDSSGA IFDRRATIGL KNRFGQITLG
RNFTTTYDYM LQFDPMGYAP NYSWATSSTA TGGRKDGLFS RSSNAVRYDG TFSGFKFGAM
YGFGNVPGSM KSSSKYDFAL GYETGPFAAV VTFDRQNGAN DSVTPADTTN YIQGIHAGLS
YDFGPVKAMA GYRNYQRTFH TAAPTLRSDM YWLGGQYEVT PFISLFAAVY HQDIKDASDA
DPTLFSLRAQ YALSKRTVLY MAGGYAMARH DNAVSLSRDL IGAADTQTGV TAGIQHRF
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