| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1036 |
|---|
| Symbol | |
|---|
| ID | 4008475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2219408 |
|---|
| End bp | 2220466 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951648 |
|---|
| Product | ABC sugar transporter, inner membrane subunit |
|---|
| Protein accession | YP_554268 |
|---|
| Protein GI | 91779060 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0147412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.898117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC ATTCTTCCAC CCATCCCGCG CCGGTCCATC CGCCGGTCGC GAAGCGCACG
GCGGGCTCGC CGGGCGGCTT TGCCGCAAGC ATCGCGAAGA GCCGCGAAAC AACGCTGTTC
GTCGTACTGA TTCTGCTGAT TGTGGGCACC GGGCTCGCGA AACCGCAGTT CCTGAACCTG
CAGAACCTGC GCGACGTGCT GCTGAACGTG TCGATCATCA GCTTGCTGAC GGCCGGCATG
ACCGTGGTGA TCCTGATGCG GCATATCGAT CTGTCGGTCG GCTCGACGGT CGGCATCAGC
GCGTATGCGG TCGGCAGCCT GTATGTCGCG TTTCCGCAGA TGCCGGTGAT CGTCGCGTTG
GCCGCGGGGC TTGCCATCGG TCTCGTGGCG GGCGGCATCA ATGCGCTGCT CGTCGCGGTG
GGACGCGTGC CGTCGCTGGT GGCGACGCTA TCCACGTTGT ACATTTTTCG CGGTGCGGAC
TATGCGTGGG TGCATGGCGG GCAGATCAAC GCCACCAGCC TGCCCGATGC TTTCTCTCGT
CTCGCGACTG GAACGTTGCT CGGCATTCCG ACGCTTGCGC TGATCGCGAT CGTCGTGCTG
GCCGGTCTCG CCGTGTATCT GAAGCAGTTT CGCGGTGGCC GCGAACACTA CGCGATCGGC
TCGAATCCGG AGGCGGCGCG TCTCGCCGGT GTGAACGTGG AGCGTCGCGT GATGGCGGGA
TTTCTGCTCT CTGGCGCGAT TGCCGGTTTT GCGGGCGCGT TGTGGCTGGC ACGCTTCGGC
ACCGTGGATG CCAGCACCGC GAAGGGCATC GAATTGCAAG TGGTGGCCGC CGCTGTGGTG
GGTAGTGTCG CAATCACTGG CGGCGTCGGC ACGATTCTCG GCGCCACGTT GGGCGCGCTC
GTGCTCGGCG TGATCAGCAT CGCGCTGGTC GTGCTGCACG TGTCGCCATT CTGGGAGCAG
GCCATCGAGG GCGCGCTGAT CGTCGCCGCG ATTACCGCCG ATACCTTGCT GGCCCGCTCC
GTCGCAAAAC GCATGATGAG GAAACGCGAT CATGGCTAA
|
|---|
| Protein sequence | MMRHSSTHPA PVHPPVAKRT AGSPGGFAAS IAKSRETTLF VVLILLIVGT GLAKPQFLNL
QNLRDVLLNV SIISLLTAGM TVVILMRHID LSVGSTVGIS AYAVGSLYVA FPQMPVIVAL
AAGLAIGLVA GGINALLVAV GRVPSLVATL STLYIFRGAD YAWVHGGQIN ATSLPDAFSR
LATGTLLGIP TLALIAIVVL AGLAVYLKQF RGGREHYAIG SNPEAARLAG VNVERRVMAG
FLLSGAIAGF AGALWLARFG TVDASTAKGI ELQVVAAAVV GSVAITGGVG TILGATLGAL
VLGVISIALV VLHVSPFWEQ AIEGALIVAA ITADTLLARS VAKRMMRKRD HG
|
|---|
| |