Gene Bxe_B1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1028 
Symbol 
ID4008483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2227955 
End bp2228707 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID637951656 
Productputative 3-oxoacyl-(acyl-carrier protein) reductase 
Protein accessionYP_554276 
Protein GI91779068 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.242243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.177071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGA TCGATCTGGA GGGGCGCGTA GTCGCCATTA CCGGCGGCGC GCGTGGCATC 
GGCTACGCGG TCGCGCAGCG GGCGTTGAAC TCGGGCGCAT CGGTCGCGCT ATGGGACGTG
GACGCCGAAC GTCTCGCCCG CAGCCAGCGT GAGCTGAGCG AGCTCGGCAA AGTCACGGCA
GTCGCCGTCG AACTGACACA GGAAGCCGCC GTCGCGCAGG CCGTGGCGCA AACCGTCGCC
GATCACGGCG CGATCGACGT GCTGATCAAT TGCGCCGGCA TCACCGGCGG CAACGGCACC
ACCTGGGAAC TGGAACCCGA CATCTGGCGC CGCGTGATCG ACGTGAACCT GATCGGCCCC
TATCTGACCT GCCGCGCGGT CGTGCCGCAA ATGCTCAGGC AGGGCTATGG CCGGATCGTC
AATATCGCTT CGGTGGCGGG CAAAGAGGGC AACCCGAACG CCTCGCACTA CAGCGCCTCC
AAGGCCGGCC TCATCGGCCT GACCAAATCG CTCGGTAAAG AACTCGCGAC GAAGAACATT
CTCGTCAACG CCGTCACACC CGCCGCGGCC AAAACCGAGA TCTTCGATTC GATGTCGCAG
CAACACATCG ACTACATGCT GTCGAAGATT CCCATGAACC GCTTCCTGTT ACCCGAAGAA
GCGGCGTCGC TGATCTTGTG GCTCTCCTCT GAGGACTGCG CGTTCAGCAC CGGTTCGGTA
TTCGACCTGT CCGGCGGGCG CGCGACCTAT TGA
 
Protein sequence
MNRIDLEGRV VAITGGARGI GYAVAQRALN SGASVALWDV DAERLARSQR ELSELGKVTA 
VAVELTQEAA VAQAVAQTVA DHGAIDVLIN CAGITGGNGT TWELEPDIWR RVIDVNLIGP
YLTCRAVVPQ MLRQGYGRIV NIASVAGKEG NPNASHYSAS KAGLIGLTKS LGKELATKNI
LVNAVTPAAA KTEIFDSMSQ QHIDYMLSKI PMNRFLLPEE AASLILWLSS EDCAFSTGSV
FDLSGGRATY