| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0963 |
|---|
| Symbol | |
|---|
| ID | 4008548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2295714 |
|---|
| End bp | 2297753 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637951721 |
|---|
| Product | 3-methylcrotonoyl-CoA carboxylase, alpha subunit |
|---|
| Protein accession | YP_554341 |
|---|
| Protein GI | 91779133 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.5845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACA AGATCCTGAT TGCCAACCGG GGCGAGATTG CGTGCCGCGT CGCCGCGACC
TGCAAGCGGC TCGGCATCGC GAGCGTGGCC GTCTATTCCG ATGCGGACGC CAACGCGAAA
CACGTGGCCG CCTGTGACGA GGCGGTGCAT ATCGGCGGTT CGAGCGCGGC GGAAAGTTAT
CTGCGCGTCG AGCGCATCAT CGAGGCCGCA CGCGCCACCG GCGCGCAGGC GGTGCATCCG
GGCTATGGCT TTCTGTCGGA GAATGAAGAT TTCGCGCAAG CGTGCGAGGC GGCCGGCATC
GTCTTTATCG GACCGCCGGT CGAAGCCATT GCCGCAATGG GATCGAAGGC CGCCGCAAAG
GCGCTGATGC ATGCGGCCGC CGTGCCGCTC GTGCCGGGTT ATCACGGCGA CGATCAGGAC
GCGCAACTGC TGCACCGCGA GGCGAATGCG ATCGGTTATC CGGTGCTGCT CAAAGCCAGC
GCCGGCGGTG GCGGCAAGGG CATGCGGGTG GTGGAGCGCA GTGAGGATTT CGCGGCGGCG
CTCGCGTCGT GCAAGCGCGA AGCCGCGAGC AGCTTCGGCA ATGATCGCGT GCTGATCGAA
AAGTACCTGA CGCGGCCGCG TCACGTGGAA GTGCAGGTGT TCGCGGATCG CCACGGCGGC
GCGGTCTATC TGTTCGATCG CGATTGTTCG GTGCAGCGGC GTCACCAGAA AGTGCTGGAG
GAAGCGCCGG CGCCCGGCTT GTCCGCTGAA ATCAAGCGCG AAATGGGCGA GGCCGCGGTG
GCCGCCGCGC GCGCGGTGAA TTACGTCGGT GCGGGCACGG TCGAGTTCAT CATGACCAGC
ACGGGCGAGT TCTACTTCAT GGAAATGAAC ACGCGCCTGC AGGTCGAGCA TCCGGTCACG
GAAATGGTGA CCGGCCAGGA CCTGGTGGAA TGGCAACTGC GTGTGGCCGC TGATCAACCG
CTGCCGCTCA CGCAGGAACA GTTGAAGATC GACGGGCACG CGATCGAAGC GCGTATCTAC
GCCGAGCATC CGGCGCGCGG CTTTCTGCCG TCGACGGGCA CGCTCAAACA TCTGCGCATG
CCGGAAGGCG TGGAATTCGC AATCGATGCG TCGGGCCTCG GCGAGCCGGG ACGCAAGGCG
CCGGTGCGTA TCGACAGCGG CGTGCGTGAA GGCGACACCA TCACGCCGTT TTACGATCCG
ATGATCGCCA AGCTGATCGT GCACGGCGCC ACGCGCGAAG AGGCGCTCGC GCGCCTGAGC
CGCGCGCTGC ATGCGTGCGA GGTGGTCGGC CCGCATACCA ACGTCGAGTT TCTGCAGAGC
ATTGTTGCGA GCGAGCCGTT TGCAACGGGC GATCTCGACA CGGGCCTGAT CGAGCGCCAT
CACGACGCCC TGTTCGCGCC GCGCAAGAAG CCGTACAAGG AAGCGCTGGC GCTCGCCTGC
GCGGCGCTGC TCACGCGCGA GGGCGGCACG GCGCACGGCG CGTCGCCGTG GGATGCGTTG
TCGCACTGGC GTCTGAATGG CGGCTATACG CAGACGCTCG GCTGGCGCGA CATAGACAGC
GGCGGCGAGA GCGCGGGCCT GTTCACGGTC ACGTTCGCGC GCGACGGCGG CACGCAAACG
CTCGAACACG ACGGCGTGCG TGAGGACTTC AAATGGTCGG ACGGCAGCGG CCCGCATGAA
TTCCGCGCAA CGATCGTCGA CGCGCGCGCA ACGGGCCGCG TGTTCGTCGA CGGCGATACG
TTCCATGTGT TCTGCCTCGG CGAAGCGCTG GCGTTCGAAT GGCAAAACCT GCTCGCCCAC
GCCGCGGACG CCGAAGGCGG CGAAGGCCGT TTGACCGCGC CGATGCCGGG CAAGGTGATC
GCGGTGCTGG TGGAGCCGGG TACCGTGGTG GAGAAGGGCA CGCCGCTCAT CGTGATGGAA
GCGATGAAGA TGGAGCACAC CATTGGTGCG CCGGCTGCGG GTACGGTCTC GGAGGTACTG
TATGCGGTTG GCGATCAGGT GGCCGATGGC GCGCAGCTTC TGGTGCTGGA CGTGCAGTAG
|
|---|
| Protein sequence | MFNKILIANR GEIACRVAAT CKRLGIASVA VYSDADANAK HVAACDEAVH IGGSSAAESY
LRVERIIEAA RATGAQAVHP GYGFLSENED FAQACEAAGI VFIGPPVEAI AAMGSKAAAK
ALMHAAAVPL VPGYHGDDQD AQLLHREANA IGYPVLLKAS AGGGGKGMRV VERSEDFAAA
LASCKREAAS SFGNDRVLIE KYLTRPRHVE VQVFADRHGG AVYLFDRDCS VQRRHQKVLE
EAPAPGLSAE IKREMGEAAV AAARAVNYVG AGTVEFIMTS TGEFYFMEMN TRLQVEHPVT
EMVTGQDLVE WQLRVAADQP LPLTQEQLKI DGHAIEARIY AEHPARGFLP STGTLKHLRM
PEGVEFAIDA SGLGEPGRKA PVRIDSGVRE GDTITPFYDP MIAKLIVHGA TREEALARLS
RALHACEVVG PHTNVEFLQS IVASEPFATG DLDTGLIERH HDALFAPRKK PYKEALALAC
AALLTREGGT AHGASPWDAL SHWRLNGGYT QTLGWRDIDS GGESAGLFTV TFARDGGTQT
LEHDGVREDF KWSDGSGPHE FRATIVDARA TGRVFVDGDT FHVFCLGEAL AFEWQNLLAH
AADAEGGEGR LTAPMPGKVI AVLVEPGTVV EKGTPLIVME AMKMEHTIGA PAAGTVSEVL
YAVGDQVADG AQLLVLDVQ
|
|---|
| |