Gene Bxe_B0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0911 
Symbol 
ID4008600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2356884 
End bp2359028 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content65% 
IMG OID637951773 
ProductTPR domain-containing protein 
Protein accessionYP_554393 
Protein GI91779185 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.55611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AGCAGCTCGC GTTCCCTATC GACGACATCA ACCGGCACGC CGTCGCGTTG 
TTCTCAGCCG GACGATTCGC CGAGGCTTTG TCGATGGTAA CGCCCCTGCT GGAAGATGAT
GCACTGCCGG CCGGCGCGCG GGCCGACGCG TTGAATATCG CCGGCGCGTG TTGTTTCGCG
TTGCAGCGGC ACACGGATGC GGAACACCAC TGGCGCCGCT GTCTGCGCAT CAAACCCGGC
TACGCGGAGG TGTACGGCAG CCTCGGCATG CTGCTCAGGT CACTAGGGCG CCTGTCCGCA
GCCAAGGCAA TGTACCGGCA ACTGGTCGCA TTGCAGCCGG CCCACGCCGA CGCCCGCAAT
CATCTCGGCG CCGTGCTTTA CGGCCTCGGC TACAAGGAGG AGGCGGAGGC GTCCTATCGC
GAGGCGCTGG TGCTTCGTCC CGGCTACGCC GAAGCTCACT ACAACCGCGG CATCGTGTTG
CACGAACTGG GCCGCCTGCA CGAAGCGGAA GCGGCGTTTC GCCACGCCGT GCCGGGACTG
CCTGGCCATG CCGAAGTCCA TAACAATCTG GGCAACGTGC TGACGGAACA GGGCCGTTTC
GCCGAAGCGG ACGCTGCCTA CCGCGAGGCG CTGGCAATCC GGCCGCATTA TCCCGAGGCG
CTCAATAACC TCGGCGGTGT CCTGAAGGCC ACCTTCCGTC TCGCCGAAGC CGAGCTGGCT
TTTCGCCTTG CGCTTGCCAT TCGTGCGGAT TACGCGGAAG CCCACCTGAA TCTCGGCACG
GTGCTCGCTG ATCTCGAACG CTTGCCCGAA GCAGAAGCCG CCTATCGCGA AGCAATCTCG
CACCGTCCCG ACTACGCTGA AGCCCACTAC AACCTCGGTG TGACGATGGG CAGGCGGGAG
CAACTGTTCG AAGCCGAAAT GGCTTACCGC GAGGCGATCC GCCTGCGGCC CGATCTCGTT
CATGCGTATA ACAACCTGGG TTGCGTGCTG CGCCGGCTCG ATCGTCTGAC GGCGGCTGTC
GAGGCTTTCA GGCATGCGCT CCGCATGTGC CCGGATCTGG CCGAGGCGCA CTACAACCTT
GGCGCGGCGT TGGCGCAGCT CATGCAACTG TCCGAGGCGG AAAACGCGTA TCGCCGGGCG
CTCGCTTTAC GTGCCGATTA CGGCGACGCG AGATTCGGGC TGGCCGTGCT GCTGCTCGGC
ATGGGCCGCT TCGAAGAGGG GTGGCGCCTG TACGAGTGCC GCTACGAGCA GCGCGCCTTC
GTCCATTACA GGACCGCTTC GATGCTGGGC TGTCCGCAAT GGCAGGGCGG CCCGCTCGAC
GGCAAGTCCC TGCTGGTGTG GCAGGAAGAC GGCCTTGGCG ACATGATCCA GTTCAGCCGC
TATTTTGCCT TGTTGAAGGC ACAGGGCGCC TCGCACATCA CGTTTGCATG CGCGCCCTCG
CTGCACAGGC TGATGGGTCG GGTCGACGGT GTGGATGCCG TGCTCGATCA CGACACCGCT
CGCGCACACC CGGCGGCTTA CGACTGCTGG ACGAGCCTGC TGAGCGCGCC GCTGCATCTG
CGTACGAGCG TGGATACGAT TCCGCGCCCC GTGCGTCTCA CAGCGGAGCC GTCGCTGATT
GATCGCTGGC GGTCGCTGCT GGATGCACTG CCGCCCGGCC GCAAGATCGG TCTGGTGTGG
AAGGGCAACG CAAACCATCA CAACGACGCG AACCGGTCGA TTCCCTCGCT CGCCATACTG
GCGCCGCTCT GGAGCGTGCC CGGCGTGAGT TTCGTGAGTC TGCAGAAAGG ACAGGGCGAG
GAAGAAGCGA GACATCCTCC CGCCGGGCAG CCGCTGCTCG ACGTTGGATC GCGCGTGACG
GATTTCGCGG ACAGTGCCGC GATCATCGCG CAACTCGATC TGGTGATTGC CGTGGATACG
TCCACCGCGC ATCTGGCCGC GTCGCTCGGC ACACCGTGCT GGGTGATGCT GCCGGAAAAA
GATATCGACT GGCGCTGGAT GCATGAACGC AGCGATTCGC CGTGGTATCC GCACACGCTG
CGCCTGTTCC GCCGCGCGCC GGGTGAAGAT TGGTCGATGC CGGTCGAGCG GGTGAGACAG
GCGTGCTTGG AGCGGTTCGC CGACGCGGAC CGCGCGCCCA CCTGA
 
Protein sequence
MTDKQLAFPI DDINRHAVAL FSAGRFAEAL SMVTPLLEDD ALPAGARADA LNIAGACCFA 
LQRHTDAEHH WRRCLRIKPG YAEVYGSLGM LLRSLGRLSA AKAMYRQLVA LQPAHADARN
HLGAVLYGLG YKEEAEASYR EALVLRPGYA EAHYNRGIVL HELGRLHEAE AAFRHAVPGL
PGHAEVHNNL GNVLTEQGRF AEADAAYREA LAIRPHYPEA LNNLGGVLKA TFRLAEAELA
FRLALAIRAD YAEAHLNLGT VLADLERLPE AEAAYREAIS HRPDYAEAHY NLGVTMGRRE
QLFEAEMAYR EAIRLRPDLV HAYNNLGCVL RRLDRLTAAV EAFRHALRMC PDLAEAHYNL
GAALAQLMQL SEAENAYRRA LALRADYGDA RFGLAVLLLG MGRFEEGWRL YECRYEQRAF
VHYRTASMLG CPQWQGGPLD GKSLLVWQED GLGDMIQFSR YFALLKAQGA SHITFACAPS
LHRLMGRVDG VDAVLDHDTA RAHPAAYDCW TSLLSAPLHL RTSVDTIPRP VRLTAEPSLI
DRWRSLLDAL PPGRKIGLVW KGNANHHNDA NRSIPSLAIL APLWSVPGVS FVSLQKGQGE
EEARHPPAGQ PLLDVGSRVT DFADSAAIIA QLDLVIAVDT STAHLAASLG TPCWVMLPEK
DIDWRWMHER SDSPWYPHTL RLFRRAPGED WSMPVERVRQ ACLERFADAD RAPT