Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0849 |
Symbol | |
ID | 4008662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2422157 |
End bp | 2423413 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637951835 |
Product | RND efflux system membrane fusion protein |
Protein accession | YP_554455 |
Protein GI | 91779247 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.8894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000437743 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACTATCC TTCCTCTTTC CCGTCGCCGT GTGGCGATCG CCGCACTTGT CGTCGTCGTC GTGGCCGGAC TGGGCACGTT CGGCGCGATT CGCGTGGACG CGAGCTCGCC CGCCGCGCCG ACCATCGTGC CGGAAGTCGA TGTCGCCACT GTGGTGCAGA AAACGATCAC GGACTGGCAG AGCTATTCGG GCCGTCTCGA AGCCGTCGAA AAGGTGGACG TGCGTTCGCA GGTGCCGGGC ACCATCGTGT CCGTCAATTT CAAGGACGGC GCGCTCGTGA AGAAGGGCGA CACGCTGTTC GTGATCGACC CGCGCCCGTA CGCCGCCGAA GTGGATCGCG CCGAAGCGCA ACTCGCCGCC GCGCAGGCGC GCACGGGTTA CACGCAGAGC GATTGGGAGC GTGCGCAACG CCTGATTGCC GACAATGCGA TCGCCAGGCG TGACTACGAC GAGAAGCAGA ACGCCGCGCG CGAAGCGAGC GCGAACCTGA AGGCCGCGCA AGCCGCCCTC GAAACCGCCC GCATCAATCT CGGCTACACG AAGATCGTCG CGCCGGTTTC GGGCCGCGTG TCGCGCGCGG AAATCACGGT GGGCAACGTC ATTTCGGCGG GCGCGACTGC TGCGCCGCTG ACCACGCTGG TGTCGGTTTC GCCGATCTAC GCATCGTTCG ACGCGGACGA ACAGACGTAT CTGCAATACC TGAGCCGCGC GAAAGACGGC AGCAAGGTGC CGGTGGAACT CGGTCTCGCG GACGAAAGCG GCTACTCGCG CAGCGGCGTG ATCGAGTCGG TGGACAACCG CCTCGACACC TCGTCGGGCA CGATCCGCGT GCGCGCGCGC TTCGATAACC AGGATGGTGC ACTGATTCCC GGTTTGTATG CGCGCGTGAA GGTAGGCGGC AGCGAACCGC ATCCGGCGCT GTTGATCGAC GACGCCGCCG TCGGTACCGA TCAGGACAAG AAATTCGTGC TGGTGGTGGA TCAGGGCAAT CACGTCGTGT ATCGCACGAT CGACGTGGGC GGCATGCAGG GCAATCTGCG CGTGGTGAAG GGCGGCCTGA AACCGGATGA CCGCATCGTC GTAAACGGTA TCCAGCGCGT GCGTCCGGGT GACACGGTGC GCGCCCATAT GGTGCCGATG ACGGCCGATC AGGATCCGAA CAGCGCGCCG CTCGCGCAAA CGCCGGCGCA ACCGCAAACG CAGACGCAAG CCCAAACGCA GACGCCGACG CGCACCAAAG CGGACAAGAA TTCGTGA
|
Protein sequence | MTILPLSRRR VAIAALVVVV VAGLGTFGAI RVDASSPAAP TIVPEVDVAT VVQKTITDWQ SYSGRLEAVE KVDVRSQVPG TIVSVNFKDG ALVKKGDTLF VIDPRPYAAE VDRAEAQLAA AQARTGYTQS DWERAQRLIA DNAIARRDYD EKQNAAREAS ANLKAAQAAL ETARINLGYT KIVAPVSGRV SRAEITVGNV ISAGATAAPL TTLVSVSPIY ASFDADEQTY LQYLSRAKDG SKVPVELGLA DESGYSRSGV IESVDNRLDT SSGTIRVRAR FDNQDGALIP GLYARVKVGG SEPHPALLID DAAVGTDQDK KFVLVVDQGN HVVYRTIDVG GMQGNLRVVK GGLKPDDRIV VNGIQRVRPG DTVRAHMVPM TADQDPNSAP LAQTPAQPQT QTQAQTQTPT RTKADKNS
|
| |