| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0778 |
|---|
| Symbol | |
|---|
| ID | 4008733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2497967 |
|---|
| End bp | 2500615 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951906 |
|---|
| Product | putative DEAD/DEAH box helicase |
|---|
| Protein accession | YP_554526 |
|---|
| Protein GI | 91779318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.274764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CGGCTGATTC CGACGAGAGC GAGGTCCCCG CTCCCTCTGC GCCGCCCGAG
CGTCGGCGCG CTCCCCGGCC GCGCCGGATT CCGCGCAGCC GCGAACAGCA GGCGCGGCTC
GACGCACGCG AACCGGCCTT CGAGCCGCTG CCTTTCGCCA TCGACGAAAC GGCCGCGCGC
CGCCCCTTCG CCGACAGACT CGCGGCATGG TTCGAGACGC GCCGCTGGCA GCCATTCGAG
TTTCAACACG AGGTCTGGCG AGAAATCGGC CGTGGCGCGA GTGGTTTGCT GCACGCCACG
ACCGGCGCAG GTAAAACCTG GGCTGTCTGG TTCGGCGCGC TGGCCGCCTT CGTGACAACG
CCGACGCCGC CTGGCCGCCC GCGTGCGACC CGCGCCCAGC CCGAACCGCT CACCGTGCTG
TGGATCACGC CGATGCGCGC GCTCGCTGCG GACACCGCGC GCGCCTTGCA AACTTCGGCG
GCAGAACTGG CCGTGCCGTG GAGCGTCGGG TTGCGCACCG GCGATACGTC GTCCGCCGAA
CGCGCACGGC AAAACCGGCG CATGCCGTCG GCGCTCGTCA CGACACCGGA AAGTCTTTCG
CTCATGCTGA CGCGCTCCGA TGCACGCGAC GTGCTTGCGC ACGTGCGACT GGTGGTCGTC
GACGAATGGC ATGAGTTGCT CGGCAACAAG CGCGGCACGC AAACGCAACT CGCGCTTGCG
CGTCTCGCGC ATTGGCGGCC TGAATTGCAG GTATGGGGGT TGTCGGCGAC GCTCGGCAAT
CTGCCCTTCG CCGCCGATGT ATTGCTCGCC CCCGTGAAGA CGCCACGCGC AAACGTGCAT
GGCGCGCTGC CCAAAGCGCT GATCGTCGAT ACGGTCATAC CCGAGACCAT CGAGCGGTTT
CCGTGGGGCG GTCATGTGGG CATGCGCCAG GTCGGCGCAG TCGCCGAGGC GATCGGCGAA
GCTCGGACTT CGCTCGTGTT TACCAACACA CGTTCGCAAT GCGAGGTGTG GTATCAGGCG
CTGCTCGAAG CGCGGCCCGA ATGGGCCGGT CTGATCGCGC TGCATCACGG CTCGCTCGAT
CAGGAAGTGC GCGAATGGGT CGAGCGCGGC CTCAAGAGCG GCTTGCTGAA AGTGGTTGTA
TGCACATCGA GCCTCGATCT GGGCGTCGAT TTTCTGCCGG TGGAGCGCGT GTTTCAGATC
GGTTCGCCGA AGGGCGTCGC ACGTTTGATG CAGCGCGCGG GCCGTTCGGG CCACGCGCCG
GGACGCCCTT CGCGAGTGAC GATCGTGCCG ACGCATGCGC TCGAACTGGT GGAAGCGGCC
GCCGCGCGCG AGGCTGTCGC GAAGCGTCAG ATAGAAGGCC GCGAAACACC GGAGAAACCG
TTCGACGTGC TGGTGCAGCA TCTCGTTACC GTGGCGATCG GCGGCGGGTT CGATGCGCGC
GAACTGTACG GCGAGATTCG CAGTACCTAT GCTTACCGGC AGTTGACGCA GGCCGAGTTC
GATTGGGCGC TCGGCTTCGT GGAAGGCGGC GGCACGGCGT TGCGCGCCTA CCCCGACTAT
CATCGCGTGG CGCGCGAAAG CGATGGGCTG TACCACGTGC CGCGCGAGGA TCTGGTGCGA
AGGCACCGCA ACAACATCGG CACGATCGTC GCCAACGGTA CCCTGAATGT CGCCTATCTC
TCGGGCGGCC GGATTGGCGC CATCGAGGAA TCGTTTATTT CGCGGCTCAA GCCCGGCGAT
ATCTTTACGT TCGGCGGGCG CGCCCTCGAA TTGATCCGCG TGCAGGATAT GACCGCGTGG
GTGCGGCGCG CCACGTCGTC GCGCGGAGCC ATGCCGCAAT GGGCCGGCAG CCGTATGCCG
CTGTCTTCCG AACTCGCCGA CGCCACGCTC ACGATGCTCG CGCGCGCCGC CGCCGGCATC
TACGACGAAC CGGAAATGCG CGCCGTGCGG CCGCTGCTCG AATTGCAGCA GAAGTGGTCG
GCATTGCCCG AACCGGGCGT ACTGGTCGTG GAGTTGGTGA AAACGCGCGA AGGCCATCAT
TTCTTTTGCT ATCCGTTTGC GGGGCGCACA GCGCATATCG GTTTGGGCGC GTTGCTCGCA
TGGCGCGTCG CACGCGAGCA GCCCGGCACC TTTTCCATTT CGATGAACGA CTACGGCTTC
GAACTGTTGT CCGCGCAACC ATTCGATTGG GCAGAGAAGC TCGAAAGCGG TTTGCTCTCT
CCCGAAGAAC TGGATCACGA CATTCTCGCG AGCCTCAATT CGTCAGAGCT CTCCATGCGG
CGCTTTCGCG AGATTGCGCG CGTGTCGGGA TTGGTATTCC AGGGGCATCC CGGGCAGCAG
AAAAGCGCGC GGCAGTTGCA AGCGTCGAGC GGCCTCTTCT ACGAGATCTT TCGCAATCAC
GATAGCGGCA ATCTGTTGCT CAACCAGGCC GATGACGAAG TGTTGCTGCA GGAACTCGAC
GCCCGGCGCA TTCGCACCGC GCTCGAACAC ATGAACACGA GCCGCCTGGT GGTCATGCGC
CCGAAAAAAC CGACGCCGTT TGCGTTTCCG TTGATCGTCG GACGCTTGCG GGAGAAGGTC
AGTACGGAGA AACTCGCGGA CCGCGTCGAG CGGATGCTGG CCGAACTCGA GAAGGCGGCC
CGCACATGA
|
|---|
| Protein sequence | MTKPADSDES EVPAPSAPPE RRRAPRPRRI PRSREQQARL DAREPAFEPL PFAIDETAAR
RPFADRLAAW FETRRWQPFE FQHEVWREIG RGASGLLHAT TGAGKTWAVW FGALAAFVTT
PTPPGRPRAT RAQPEPLTVL WITPMRALAA DTARALQTSA AELAVPWSVG LRTGDTSSAE
RARQNRRMPS ALVTTPESLS LMLTRSDARD VLAHVRLVVV DEWHELLGNK RGTQTQLALA
RLAHWRPELQ VWGLSATLGN LPFAADVLLA PVKTPRANVH GALPKALIVD TVIPETIERF
PWGGHVGMRQ VGAVAEAIGE ARTSLVFTNT RSQCEVWYQA LLEARPEWAG LIALHHGSLD
QEVREWVERG LKSGLLKVVV CTSSLDLGVD FLPVERVFQI GSPKGVARLM QRAGRSGHAP
GRPSRVTIVP THALELVEAA AAREAVAKRQ IEGRETPEKP FDVLVQHLVT VAIGGGFDAR
ELYGEIRSTY AYRQLTQAEF DWALGFVEGG GTALRAYPDY HRVARESDGL YHVPREDLVR
RHRNNIGTIV ANGTLNVAYL SGGRIGAIEE SFISRLKPGD IFTFGGRALE LIRVQDMTAW
VRRATSSRGA MPQWAGSRMP LSSELADATL TMLARAAAGI YDEPEMRAVR PLLELQQKWS
ALPEPGVLVV ELVKTREGHH FFCYPFAGRT AHIGLGALLA WRVAREQPGT FSISMNDYGF
ELLSAQPFDW AEKLESGLLS PEELDHDILA SLNSSELSMR RFREIARVSG LVFQGHPGQQ
KSARQLQASS GLFYEIFRNH DSGNLLLNQA DDEVLLQELD ARRIRTALEH MNTSRLVVMR
PKKPTPFAFP LIVGRLREKV STEKLADRVE RMLAELEKAA RT
|
|---|
| |