Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0676 |
Symbol | |
ID | 4008835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2621552 |
End bp | 2622922 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637952007 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_554627 |
Protein GI | 91779419 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGATT CGGCGCCTGC GCTGCCCGGC GCCCCCGAGA TTGCCGCGCT CGTGTCCTAT CTGGAATACG ACCCGCAGCC CTCGATCGTG CTCGATCCGG ACTACCGCAT TCTTGCGGCC AATACCGCGT ACCAGCGGCA GTTCGGCGTG GCAGGGCAGC CGCACGTGGG GCGCCGCTGC TACCAGGTAT CGCACCACTA CGAGGTGCCG TGCGATCAGG CCGGCGAGCA TTGCCCGATG AAGCGCGCGT CCGATACGCG CAGCGCGGAT CGCGTGCTGC ACATCCATCA CACGCCGCGC GGCCCCGAGC ACGTGGACGT TGAACTGCGG CCGATCTTCG ACACCCGGTC TGAGATCGTC GCGTATGTCG AGCGGCTCTC CACGGTGCGC GGCGCCTCCG CGCGGCCGAG CGTGGATGGC CTCGTCGGCC GCGCACCCGC ATTCAACGAG GCGATCTCGG CATTGCAGCG TGTCGCGCCG TCGATGTTGC CCGTGCTGCT GCTCGGCGAG TCCGGCACCG GCAAGGAGCT GTTCGCCCAT GCGCTGCACG AGGCAAGCGA TCGGGCACAA CGGCCGTTCG TCGTGGTCGA TTGCTCCGGC ATCACGGAGA CGCTGTTCGA GAGCGAACTG TTCGGCTACG AGAAGGGCTC GTTTACCGGC GCCTCGACCC GCAAGCCGGG ACTCGTCGAA ACGGCCCAAG GCGGGACGCT GTTTCTCGAC GAAATAGGCG ACGTGCCGTT GTCGATGCAG GTCAAGCTGC TGCGTCTCAT CGAGACGGGC GCGTTCCGCC GCGTGGGCAG CGTCGAGACG CAGCGCGCGG ACTTCCGGCT CGTCGCGGCG ACTCACAAGC CGCTCGAGCA GATGCTGGCG ACCGGACAGT TCCGCTCGGA CCTGTATTTC CGCATCAGCG CGTTCCCGAT CCGCCTGCCG GCGCTGCGCG ACCGTGCCGA CGACATTCCG CTGCTGGTGG ACTCGACTTT GCAGCGCATC GCCTCCGGGC GCAGCGCAGC ACCGCGCAAG ACCTCGGTCG CAGCGGATGC GCTCGCCCGG CTGTGCGCCT TTCGCTGGCC GGGCAACATC CGCGAGCTAC GCAACGTGCT CGAACGCGCG AGCCTGCTGG CGGACGACGG TGTGATCCGC CCGGAACATT TGCCGGACAC GGTCAGGGCC GACGTATCGC CGGCGAGTCC TGCGGCTGCG CCGCTGCGCC ATTCCGCTCG CATCAAGCTC ACGGACGCCG AACTGGCTCG CATGGCCGCG GATTTCGTGG GGAGGCGCAA GGAGCTCGCC GCACAACTCG GCATGAGCGA GCGCACGCTG TACCGGCGGC TAAAGGCTCT TGGCGAAGAG GACCCGCACG GCGAACGCTA A
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Protein sequence | MPDSAPALPG APEIAALVSY LEYDPQPSIV LDPDYRILAA NTAYQRQFGV AGQPHVGRRC YQVSHHYEVP CDQAGEHCPM KRASDTRSAD RVLHIHHTPR GPEHVDVELR PIFDTRSEIV AYVERLSTVR GASARPSVDG LVGRAPAFNE AISALQRVAP SMLPVLLLGE SGTGKELFAH ALHEASDRAQ RPFVVVDCSG ITETLFESEL FGYEKGSFTG ASTRKPGLVE TAQGGTLFLD EIGDVPLSMQ VKLLRLIETG AFRRVGSVET QRADFRLVAA THKPLEQMLA TGQFRSDLYF RISAFPIRLP ALRDRADDIP LLVDSTLQRI ASGRSAAPRK TSVAADALAR LCAFRWPGNI RELRNVLERA SLLADDGVIR PEHLPDTVRA DVSPASPAAA PLRHSARIKL TDAELARMAA DFVGRRKELA AQLGMSERTL YRRLKALGEE DPHGER
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