Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0646 |
Symbol | pcaD |
ID | 4008865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2657607 |
End bp | 2658398 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637952037 |
Product | 3-oxoadipate enol-lactonase (pcaD) |
Protein accession | YP_554657 |
Protein GI | 91779449 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.063322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATACG CCGCAGTCAA CGGCACCGAG CTTCACTATC GAATCGACGG CGAGCGCCAC GGCAACGCGC CGTGGATCGT CCTGTCGAAT TCGCTCGGCA CCGATCTGTC CATGTGGGCG CCGCAAGTCG CGGCGCTGTC GAAACACTTT CGCGTGCTGC GCTACGACAC GCGCGGCCAC GGCCACTCGG AAGCGCCGAA AGGCCCGTAC ACGATCGAGC AACTGACCGG CGACGTGCTC GGCCTGATGG ATACGCTGAA GATCGCCCGC GCGAATTTCT GCGGACTGTC GATGGGCGGC CTGACCGGCG TTGCGTTGGC CGCGCGCCAC GCGGATCGGA TCGAGCGCGT CGCGCTGTGC AATACGGCCG CGCGCATCGG CTCGCCGGAA GTGTGGGTGC CGCGCGCCGT GAAGGCGCGC ACCGAAGGCA TGCACGCGCT GGCCGATGCC GTCCTGCCGC GCTGGTTCAC GGCGGACTAC ATGGAACGCG AACCGGTGGT GCTGGCCATG ATTCGCGACG TGTTCGTGCA TACCGACAAG GAAGGCTACG CCTCCAACTG CGAAGCCATC GACGCCGCCG ACCTGCGTCC CGAGGCGCCC GGCATCAAGG TGCCGGCGCT GGTGATCAGC GGCACGCACG ATCTGGCCGC GACGCCGGCG CAAGGCCGCG AACTGGCGCA GGCGATCGCG GGCGCGCGCT ACGTGGAACT GGATGCCTCG CACATTTCCA ACATCGAGAG AGCCGACGCT TTCACGAAGA CCGTGGTCGA CTTCCTGACG GAGCAGAAAT GA
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Protein sequence | MPYAAVNGTE LHYRIDGERH GNAPWIVLSN SLGTDLSMWA PQVAALSKHF RVLRYDTRGH GHSEAPKGPY TIEQLTGDVL GLMDTLKIAR ANFCGLSMGG LTGVALAARH ADRIERVALC NTAARIGSPE VWVPRAVKAR TEGMHALADA VLPRWFTADY MEREPVVLAM IRDVFVHTDK EGYASNCEAI DAADLRPEAP GIKVPALVIS GTHDLAATPA QGRELAQAIA GARYVELDAS HISNIERADA FTKTVVDFLT EQK
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