Gene Bxe_B0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0646 
SymbolpcaD 
ID4008865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2657607 
End bp2658398 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID637952037 
Product3-oxoadipate enol-lactonase (pcaD) 
Protein accessionYP_554657 
Protein GI91779449 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.063322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACG CCGCAGTCAA CGGCACCGAG CTTCACTATC GAATCGACGG CGAGCGCCAC 
GGCAACGCGC CGTGGATCGT CCTGTCGAAT TCGCTCGGCA CCGATCTGTC CATGTGGGCG
CCGCAAGTCG CGGCGCTGTC GAAACACTTT CGCGTGCTGC GCTACGACAC GCGCGGCCAC
GGCCACTCGG AAGCGCCGAA AGGCCCGTAC ACGATCGAGC AACTGACCGG CGACGTGCTC
GGCCTGATGG ATACGCTGAA GATCGCCCGC GCGAATTTCT GCGGACTGTC GATGGGCGGC
CTGACCGGCG TTGCGTTGGC CGCGCGCCAC GCGGATCGGA TCGAGCGCGT CGCGCTGTGC
AATACGGCCG CGCGCATCGG CTCGCCGGAA GTGTGGGTGC CGCGCGCCGT GAAGGCGCGC
ACCGAAGGCA TGCACGCGCT GGCCGATGCC GTCCTGCCGC GCTGGTTCAC GGCGGACTAC
ATGGAACGCG AACCGGTGGT GCTGGCCATG ATTCGCGACG TGTTCGTGCA TACCGACAAG
GAAGGCTACG CCTCCAACTG CGAAGCCATC GACGCCGCCG ACCTGCGTCC CGAGGCGCCC
GGCATCAAGG TGCCGGCGCT GGTGATCAGC GGCACGCACG ATCTGGCCGC GACGCCGGCG
CAAGGCCGCG AACTGGCGCA GGCGATCGCG GGCGCGCGCT ACGTGGAACT GGATGCCTCG
CACATTTCCA ACATCGAGAG AGCCGACGCT TTCACGAAGA CCGTGGTCGA CTTCCTGACG
GAGCAGAAAT GA
 
Protein sequence
MPYAAVNGTE LHYRIDGERH GNAPWIVLSN SLGTDLSMWA PQVAALSKHF RVLRYDTRGH 
GHSEAPKGPY TIEQLTGDVL GLMDTLKIAR ANFCGLSMGG LTGVALAARH ADRIERVALC
NTAARIGSPE VWVPRAVKAR TEGMHALADA VLPRWFTADY MEREPVVLAM IRDVFVHTDK
EGYASNCEAI DAADLRPEAP GIKVPALVIS GTHDLAATPA QGRELAQAIA GARYVELDAS
HISNIERADA FTKTVVDFLT EQK