| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0620 |
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| Symbol | |
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| ID | 4008891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2685668 |
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| End bp | 2686819 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952061 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_554681 |
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| Protein GI | 91779473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0145861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCCTCATCGC AGCAGGCCTC CTGGGCGCGG TTGCCATCAC CGCCCACGCG
CAGAGCAGCG TGACGTTGTA CGGTACGCTG GACGCCGGTC TCGTGTACTC GAACAACCAG
GGCGGCCACA GCAACTGGCA GCAAGGCAGC GGCGTGGCAT CGGACACGTA CTTCGGTCTG
CGCGGCAATG AAGATCTGGG CGGCGGTCTG CACGCCATCT TCACGTTGGA AAGCGGCTTC
AACCTGAACA ACGGCAAGTA CTCGGAAAGC AACACGATGT TCAATCGTCA GGCTTTCGTC
GGTCTGCAGA GCGACAGGTA CGGCGCGCTG ACGCTCGGCC GTCAATACGA CTCCGTGGTC
GACTACCTGG CACCGCTGTC CGCAGCCGGC GCGGGTTACG GCAACAACCT CGCGGGTCAC
CCGCTCGACA ACGACAATCT GGACAACTCG TTCTCGGTCA AGAACGCCGT GAAGTACACG
AGCGCGAATT ACGCGGGCCT CAAGTTCGGC GGCCTGTATG GCTTCAGCAA TTCGGCCGGC
GACTTCTCGA ACAACCGCGC ATGGAGCGTC GGTGCTTCGT ACGAGAACGG TCCGTTGAAC
GTGGCCGCGG CTTACCTGCA ACTGAACAAG TCGGGCAGCT CGAACCTGAG CGGCGCGGTA
TCGCAGGGTG ACGGCACCGC GGCAGTCGCA GCCGATCTGC AACGCACGTT CGGCGCGGGC
ATCAACTATA CGTACGGCCC GGCAACGGTC GGCTTCGTCT ACACGCACAC GCAACTGGAC
GGCATCAGCG GCGTGGACGT CGGCGGCACG ACCCTGCCTG GCGTAGCAGG CACCAACCTG
CATCTGGACA ATTACGAAGT GAACGGCCGC TATGCACTGA CGCCGGCACT GAGCCTCGCG
GCGTCGTACA CGTTCACGGA CGGCAAGATG TCCGGTTCCA ACGGTTCGGG CGATCCGAAG
TGGCACACGG TCTCGCTGCA AGGCGACTAC TCGCTGAGCA AGCGTACCGA CGTGTACGTG
GAAGGCGTGT ACCAGCATGC GTCGGGCGAA CTCGGCAACT TCGGCGCGAA CGTCGCGGCG
ATCAACACGC TGGCGCCGTC GTCGACCGGC AATCAGATCG CGGCGGCAGT CGGCCTGCGT
CACCGCTTCT AA
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| Protein sequence | MKKTLIAAGL LGAVAITAHA QSSVTLYGTL DAGLVYSNNQ GGHSNWQQGS GVASDTYFGL
RGNEDLGGGL HAIFTLESGF NLNNGKYSES NTMFNRQAFV GLQSDRYGAL TLGRQYDSVV
DYLAPLSAAG AGYGNNLAGH PLDNDNLDNS FSVKNAVKYT SANYAGLKFG GLYGFSNSAG
DFSNNRAWSV GASYENGPLN VAAAYLQLNK SGSSNLSGAV SQGDGTAAVA ADLQRTFGAG
INYTYGPATV GFVYTHTQLD GISGVDVGGT TLPGVAGTNL HLDNYEVNGR YALTPALSLA
ASYTFTDGKM SGSNGSGDPK WHTVSLQGDY SLSKRTDVYV EGVYQHASGE LGNFGANVAA
INTLAPSSTG NQIAAAVGLR HRF
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