| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0590 |
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| Symbol | |
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| ID | 4008921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2715246 |
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| End bp | 2716475 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637952090 |
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| Product | ABC sugar transporter, periplasmic ligand binding protein |
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| Protein accession | YP_554710 |
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| Protein GI | 91779502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00160074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.517835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC GAACATCCCT CAAGACCTGT GCATTTGCAC TCGCCACCGT TGCCATGCTG
GCCGGCTCCG CCGTGCAGAG CCAGGCCCAG ACGCCGCCCA AGAAGTACAA GATCTATCTG
AGCATGAGTT ACAGCGGCAA CGGCTATCAA ACCGAAACGT CGAACCTGAT CAAGGCGCTC
GCGGCAACGC CGCCGTACGA CAAGCTCGTC GATCTGAAGA CCGTCATCTC CGGCACCGAC
GTGCAGGCGC AGGCCGCTGC GTACCAGAGC ATGGTGTCGG CGGGCGCGGA TGCCATCATC
ACGTTTCCGA TCTCGTCGAC CGGCCTGAAC CGTGCTATCC ACGAAGCGTG CGAAAAGCAT
GTGCTGGTCT ACACGTATAG CGCGACGGTA ACCGAGCCGT GTGCGCGCAC GGTCAGCTAC
ATCACGGCGG GCTTCGCGCC GAACACCGCG CAATGGCTCG TGAACAAGCT GAACGGCAAG
GGCAATGTAT TCATCGATCG CGGCGTGGCA GGCAATTCCG TCGACAAGAT GAACTACGAC
GGCGCGATGA GCGTGTTCAG AAAGTACCCG GGGATCAAGA TCGTCGCCGA ATACTATGGC
ATGTGGAACA GCCAGACCAC GCAGCAGGAA ACGGCCAAGG CGCTCGCCGC GCACCCTGAC
GTCGACGCGA TTTTCGGCGA GAACGGAGAG GACGGTATCG TCGCCGCGAT GCTCGCGAGC
GGCCAGAAGA AACTCGTTCC GGTGACGGGC GAAAACACCA ACGGATTCCG TCTCGCGCTC
GCCAATGCCG ATCTGAGAAA ACGCGGTCTC GACGGCATTT CGTCGGGCGA CCCGATCAAC
GTGTCTGGCT ACGCGTTCAA GCTGATGATG GAAGAGCTGA CCGGCAAGCG CAAAGTGGCG
GTGCATAACA TCGAATACCC GCTGCCGTGG GTGCCGGCCG ACAAGGTCAA GGTGTGCACC
GGCGACACGT TCGTCAACGG GTGCAACGCG TTCCCGTCCA CCAAGGTGCC CGACTCGTTC
AATACCGAAG TGTTCGATCC CGTGTTGACG CCGGAGCTTT CGCTCAATTC GGCGCTGCAT
GGCACTCCGA CTCCGGGCGC AACGATCCAG CCGCTGCCCG CGAACGTCGT CAGGCAGGCA
CCGGATGTGC CGGGTGTGAA CTGTCAGCAT TGCCAGGCTC CGGCCGACCT GTTCAAACTG
ACGAAGGTCT CCGCGACGGT CCATCCGTAA
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| Protein sequence | MKFRTSLKTC AFALATVAML AGSAVQSQAQ TPPKKYKIYL SMSYSGNGYQ TETSNLIKAL
AATPPYDKLV DLKTVISGTD VQAQAAAYQS MVSAGADAII TFPISSTGLN RAIHEACEKH
VLVYTYSATV TEPCARTVSY ITAGFAPNTA QWLVNKLNGK GNVFIDRGVA GNSVDKMNYD
GAMSVFRKYP GIKIVAEYYG MWNSQTTQQE TAKALAAHPD VDAIFGENGE DGIVAAMLAS
GQKKLVPVTG ENTNGFRLAL ANADLRKRGL DGISSGDPIN VSGYAFKLMM EELTGKRKVA
VHNIEYPLPW VPADKVKVCT GDTFVNGCNA FPSTKVPDSF NTEVFDPVLT PELSLNSALH
GTPTPGATIQ PLPANVVRQA PDVPGVNCQH CQAPADLFKL TKVSATVHP
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