| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0507 |
|---|
| Symbol | |
|---|
| ID | 4009004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2817633 |
|---|
| End bp | 2819855 |
|---|
| Gene Length | 2223 bp |
|---|
| Protein Length | 740 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637952170 |
|---|
| Product | exopolysaccharide transporter |
|---|
| Protein accession | YP_554790 |
|---|
| Protein GI | 91779582 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC AATTTTCCCG CGACGAGGAC GAAATTGACA TCCGTGCACT TATCGATGTC
ATTTTCAAGA ACAAGAAGTT GATAGCCACG GTCACCATCG TGTGCATGGT TTTTGGAGTC
ATGTACGCAT TCCTGGCTAC GCCGATTTAT CGTGGTGATA TCACGGTTCA GGTGGAAGAT
AACTCTGACC TGGCAGGTGC AGCGGCCGGC AATCTGATGA GCGGATTGAC CTCCCTGTTC
GACATCAAAT CGACCGACGA CGGCGAAATG CAGATCCTCG ACTCACGGCT TGTCACCGCA
AACATGGTGG ATGAGCTGCA CCTTTACATC GACGCGAAGC CTAAATATTT CCCCCTTTTC
GGGGCATTTA TCGCGAAGCA CAGAAACTCG CTGTCGCACC CGGGGATATT TGGTCTGGGC
GGATATGCGT GGGGCTCGGA AACCATAGGG GTCGATCAAT TCGACGTGCC TCGCGAATTC
GAAGAAGACA AGTTCTCCGT CACCGCGCTA GGTAACAACC GATATCGGCT TTCGGGCAGC
GATCTCGATG CCGATGTCAC GGGTGAAGTC GGAGTTCCCC TGGCAGTGAA CACTCCTTCT
GGACAAGTCA AGCTACTGGT GTCGCAGTTG AACGCCAGCG AGAACGCGAA ATTTGAGCTG
AAGCGCTATT CCCGGATTCA GGTCCTGGAA CAGCTGCGGA AAGACCTCGT GATTTCGGAA
ATGGGCAAGG ATCAGTCCGG CGTCATTGGC GTGACTTATG ACGATGAGGA TCCCGTACGA
GCGGCCACAG TCTTGAACAG GATCGCGGAA AACTACGTCG CGCAAAATGC CGACCGCAAG
GCGGCGGCGG CAGAGAAGTC TCTCGTCTTT CTGAAGAGTC AACTTCCGGA AATAGAGCAT
ACCCTGCGGC TGGCCGAAGA CCGCCTCAAT GTGTATCAGA ACCACCATAA AGTCGTCGAT
CTCAGCGAGC AGGCAAAGGC CGTGTTGGGA CAGGCCGTCG AGGCGCAATC CAGTCTGTTC
CAGCTCGAGC AGAAGCGTAA GGAACTCGCA ACGATCTACA GCGCCCAGTA TCCCGCCGTG
CTTGCACTGG ATCAACAGAT CGCCGCCGCG CGCGCGCATA TCGACAACTT CAACGAATCG
ATCCAGCGGC TACCGGATGA TCAGCAAAAT ATTGTCCGGC TGAATCGTGA CGTAACTGTT
CAAACGAGTC TGTATGTTGG ATTGCTCAAC AGCGTTCAAC AACTGCAACT CGCCACCGCA
AGCAAGATCG GAAACGTACG CGTGATCGAC CGCGCATTGG TCGCCGACAA ACCAACGAAG
CCAAAGAAAG CGCTTGTTAT TGTCCTGGCA ACCGTTATCG GCCTGTTTGG CGGAGTCGGA
TTTGCACTGG CACGTTCAAC ATTGTTCGGC GGCCTGACTG ATCCCGTGGA TATCGAGCGT
GATCTGTCTC TCGACGTCAT TGCCACTATT CCGCTAAGCG ACACCCAGCG CCAGTTGACG
CGAGTCAGGG AGCGAGGCGG CCGGCGCGGT CCGTCGATCC TTGCATTGGC TCGACCGCAG
GAACCGGCAG TCGAAGCCAT TCGAAGTCTC TGCACCGCGT TGCAGTTCGC GCTGCTGGAG
AACCCGAAGA ACAACGTCAT TCTGATGACC GGCCCTTCGG TCGGCATTGG TAAATCGTTC
ACCTCCGCGA ATCTGGCAAC TCTGCTGGGA ATGTCAAAGA AGCGCGTGCT GTTGATGGAC
GTCGATCTGC GCCGCGGACA TCTGGCTGCC GAGTTCGGTG TGTCCGGCAA AGTCGGCCTC
TCCAACGTTC TCAGGGATGA CATGCCGCTG GACGCGGCAA TCATCAAAGA CGTGTCTCGG
AACGTGGATT TGCTTGCTAC CGGTCCGCTG ATGGCGCAGC CGGTCGAATT GCTGTCTTCC
GGCGGCATCG CCAATATTCT GGCAGAGGTA TCGAGCCGAT ACGACATCGT TCTTCTCGAC
GCACCACCGG TACTGCCGGT CACGGATGCG ACGGTCTTCG CGCCCTTCGC GGGGATCGTT
CTTCTAGCAG CACGTTCGGG CATGACCAGC GGTGGCGAAC TTCTCGAATC CGCCAAACGA
ATCGAGCGTG TCGGGGCGAA GATCACCGGG ATCGTCTTTA ACGGTTTCAG GCCAAGCCTG
CGCTCCGCGC AGTATGGAGA CTATGGCGGC TATGCGTACC TGAGTAACGC GACTGACACA
TGA
|
|---|
| Protein sequence | MKNQFSRDED EIDIRALIDV IFKNKKLIAT VTIVCMVFGV MYAFLATPIY RGDITVQVED
NSDLAGAAAG NLMSGLTSLF DIKSTDDGEM QILDSRLVTA NMVDELHLYI DAKPKYFPLF
GAFIAKHRNS LSHPGIFGLG GYAWGSETIG VDQFDVPREF EEDKFSVTAL GNNRYRLSGS
DLDADVTGEV GVPLAVNTPS GQVKLLVSQL NASENAKFEL KRYSRIQVLE QLRKDLVISE
MGKDQSGVIG VTYDDEDPVR AATVLNRIAE NYVAQNADRK AAAAEKSLVF LKSQLPEIEH
TLRLAEDRLN VYQNHHKVVD LSEQAKAVLG QAVEAQSSLF QLEQKRKELA TIYSAQYPAV
LALDQQIAAA RAHIDNFNES IQRLPDDQQN IVRLNRDVTV QTSLYVGLLN SVQQLQLATA
SKIGNVRVID RALVADKPTK PKKALVIVLA TVIGLFGGVG FALARSTLFG GLTDPVDIER
DLSLDVIATI PLSDTQRQLT RVRERGGRRG PSILALARPQ EPAVEAIRSL CTALQFALLE
NPKNNVILMT GPSVGIGKSF TSANLATLLG MSKKRVLLMD VDLRRGHLAA EFGVSGKVGL
SNVLRDDMPL DAAIIKDVSR NVDLLATGPL MAQPVELLSS GGIANILAEV SSRYDIVLLD
APPVLPVTDA TVFAPFAGIV LLAARSGMTS GGELLESAKR IERVGAKITG IVFNGFRPSL
RSAQYGDYGG YAYLSNATDT
|
|---|
| |