| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0438 |
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| Symbol | |
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| ID | 4009073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2889121 |
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| End bp | 2890146 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952239 |
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| Product | TRAP dicarboxylate transporter, periplasmic ligand binding subunit DctP |
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| Protein accession | YP_554859 |
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| Protein GI | 91779651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC TCGCGAGACG CACCCTGCTG CGCGCGGCAG CCGCCGTGCC GGTAGCCGGC
GCACTGGGCT TTCCGGCGAT CGTGCGCGCG GCGTCCGGCC CGGAGTTCGT GTTCAAGTAC
GGCAACAACC TGCCGCTCAC GCATCCGCTG AACGTGCGCT CGCAGGAGGC CGCGAATCAG
ATCAAAGAGG CGTCGAAAGG GCGCATGGAG ATCCGGATCT TCCCGAACAA CCAGTTGGGC
GGCGACACCG ACATGCTCGC GCAGGTGCGC AGTGGCGGCA TCGAGATGTT CACGCCATCG
GCGCTGGTGG TGTCGACGCT GGTGCCGTCG GTTGCGATCA ACGCGGTGGG CTTTGCGTTC
AGCGACTACA ACCAGGTGTG GGGCGCTATG GACGGCAAGC TCGGCGCCTA CGTGCGCACG
GCGATGCAGA AGGCCGGCCT CGAATCGTTC GAGAAGATGT GGGACAACGG CTTTCGTCAG
ACCACCACCA GCAACGGTCC GATCACGAGC GCGCAGAACA TGCGCGGCCT GAAAATTCGC
GTGCCGGTGA GTCCGCTCAG CATCGATATG TTCAAAGGAC TCGGTGCGGC GCCGACGAGT
TTGCAATTCA GCGAGGTCTA TTCGTCGCTG CAAACGCATA TTGTCGATGC GCAGGAAAAT
CCGCTGCCGA TCGTGCAGGT CGCCAAGCTC TACGAAGTGC AGAAGTACTG TTCGCTGACC
AATCACATGT GGGACGGCTA CTGGTTCGTG CTGAACCAGC GCGCGTGGCA ACGCTTGCCC
AAGGATCTGC AGGGCATTGC CAGCGACGCG TTCAACCAGT CGGCGCTCAG GCAGCGCGAA
GACGTGCGCA AGCTGAACGA GGCGGCGGTT GCGGATCTGC AAAGCAAGGG TCTGTCGATC
AACCGTCCCG CGCCCGATAC GTTCCGCGCG GCGCTGCGGC AGGCGGGGTT TTACGCCGAA
TGGAAGAACA GGTTCGGCAA TCAGGCGTGG GACCTGCTCG AACAATCGGT CGGCAAGCTG
GCCTGA
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| Protein sequence | MTNLARRTLL RAAAAVPVAG ALGFPAIVRA ASGPEFVFKY GNNLPLTHPL NVRSQEAANQ
IKEASKGRME IRIFPNNQLG GDTDMLAQVR SGGIEMFTPS ALVVSTLVPS VAINAVGFAF
SDYNQVWGAM DGKLGAYVRT AMQKAGLESF EKMWDNGFRQ TTTSNGPITS AQNMRGLKIR
VPVSPLSIDM FKGLGAAPTS LQFSEVYSSL QTHIVDAQEN PLPIVQVAKL YEVQKYCSLT
NHMWDGYWFV LNQRAWQRLP KDLQGIASDA FNQSALRQRE DVRKLNEAAV ADLQSKGLSI
NRPAPDTFRA ALRQAGFYAE WKNRFGNQAW DLLEQSVGKL A
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