Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0330 |
Symbol | |
ID | 4009181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 3006340 |
End bp | 3007173 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637952346 |
Product | putative spermidine synthase |
Protein accession | YP_554966 |
Protein GI | 91779758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCGGCCA ATCACCATCA CTTCAGGCAG GCGCTGGCGG AACTGTTGAA AGGGCCGCCC GGAAATCCCG TACCCGTGGT AAGCGACGGG TTGCGCACCC GGTCGCTGCG CTTCGGTCCA TTGGGCATAC AAAGCTCGAT GCGCAAGCGC GACCCGTTCG AGCTCGACCT CCCGTACACG CGGGCCATGA TGACCTTCGG GCTCTTCCAC CCCGCGCCGC AAGACATCCT GATCGTGGGG CTGGGCGGAG GATCGTTGTC CAAATACTGC TTCCGGAAGT TTCCCTCGGC GCGGGTCACT ACGGTCGAAA TCGACGCGAA CGTGATCGCG CTGCGTGAAC GTTTTTTCGT CCCGCCCGAT TCGGCAAGAT TCCGCATCGT GCATGCGGAC GCGGCGGCGT ATCTGTCGGA CAGCACGGGC ATCGCGGACG TGATCCTGCT CGACGGCTTC GACGCAACGG GTCTGCCCGC CGCCCTGTCC AGCCAGTCCT TTTACGATTC CTGCCGTGCG GCGCTGCGCG ACAAAGGGGT TCTCGTGTCA AACCTGCTGA ACAATGACGT CCGGCTCACC ACGCACCTCG CCCGGATGCG CCGGGCGTGC GACGCAAACC TGCTCCGCAC CACGGCGCAG TGCGGGGCTA ACGTCATTGC TCTTGGCCTC AAGCGGAGAA CCGTGCCGGC GTGGGACGAC CTTCATGCCC GCGCGAAGGC CCTGACGACA TCGCTGGGTC TCGACCTGTG TCGCCACGTC AAAAGAATGG AACATCATTA CCGGGAGGAG TCTCTTTCGG GATACCCTTC ATCCGGCGAG CCTGCCGTCG AACACGACAT CTGA
|
Protein sequence | MSANHHHFRQ ALAELLKGPP GNPVPVVSDG LRTRSLRFGP LGIQSSMRKR DPFELDLPYT RAMMTFGLFH PAPQDILIVG LGGGSLSKYC FRKFPSARVT TVEIDANVIA LRERFFVPPD SARFRIVHAD AAAYLSDSTG IADVILLDGF DATGLPAALS SQSFYDSCRA ALRDKGVLVS NLLNNDVRLT THLARMRRAC DANLLRTTAQ CGANVIALGL KRRTVPAWDD LHARAKALTT SLGLDLCRHV KRMEHHYREE SLSGYPSSGE PAVEHDI
|
| |