| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0221 |
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| Symbol | |
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| ID | 4009290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 3115161 |
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| End bp | 3120116 |
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| Gene Length | 4956 bp |
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| Protein Length | 1651 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637952452 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_555072 |
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| Protein GI | 91779864 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC GCGTCGAGGA GATCGCGTTG AAAGAGCCGG ACCGTTTTGT GTCGGATGAA
TCGCCCGACG GCTTTGACGC GCCGTCCTTC CTCGCCGGCG GCGGCGAGCT GGGCGCGCTC
ATTCGCGCTT ACGACTGGAC GCAGACGGCG CTCGGCCCGC CCGAGAACTG GCCGCAAGGG
CTGAAGATCG CGATCCGTAT CATGCTCACG TCGCGCCAGC CGATCTGGAT TGGCTGGCGC
GACGAGCTAC TCTATTTTTA CAACGACCCA TATAAATCGA TCATTGGCGG CAAGCATCCG
GCCGCGCTCG GGCAGCCGAC CAAAGTCGTG TGGCGCGAAA TCTGGACCGA TATCGAGCCG
CTTCTGAATA CCGCGCTGGC GGGCGCCGAA GGCATCTTCG TCGAACAGAA GCTGCTCATC
ATGGAGCGCA ACGGCTTTCC CGAAGAGACG TATTACACCT TCTCGTACAG CCCGATTCCC
GGCGACGACG GCGAACCCGG CGGCATCATC TGCGCCAACA GCGACGGCAC GGCGCAGGTG
GTGGGCGAAC GGCAACTGGC GCTGCTGAAG GAACTGGCGG CGGTCAGCCC GAACGGCCGC
GACTGGCGCC ACGCGTGCGA GCTCAGCGCG CGGGCCTTGC AGGCTAACCC GCAAGACCTT
CCGTTCGCTC TGTTGTATGC CGCCGAGCCG GGCAGCGACA CCGTCGCGCT GGTTGGCGCG
TGCGGCATCG AGCCGGGCCA CGCCGCGGCT CCGCAAACCA TGAAGCTCGA CGGCGAGGCG
CTGTGGCCCG TCGTCGACGT GTTCGATACC CAGGCGCCGC GGCTGGTGGG TGATCTGACC
CAGCGTTTCG GCACCGCGTT GCCGAGCGGT CCGTGGCATA TCCCGCCGCA GCAGGCGGTC
ATCCTGCCGG TGTCGCCCGG CAGCGAATCG ACGCAAACGG TGGTTCTGGT CGCCGGCCTG
AATCCTTGCC GTCTTTTCGA CGACGCCTAT CGCAGTTTCC TGAACCTGGC CGCCGGTCAG
ATCGGCGCGG CGATCGGTTA CGCGCGGGCG TACGAGGAGG AGCGGCGGCG CGCGGAAGCG
CTGGCCGAAA TCGACCGCGC GAAGACCACG TTCTTCTCCA ACATCAGCCA CGAATTCCGT
ACGCCGTTGA CGCTGATGCT CGGCCCGCTC GAAGAACTGC TTGCCAAGCC GCAGCTGGCC
GCAGGCGGCG ACAACGCGCG GGTAGGCAGC GACATCGAGG ACCGCGCGCT GATCGAGATC
ACGCATCGCA ACGGCTTGCG GCTGCTGAAG CTCGTCAATG CGCTGCTGGA CTTCTCGCGC
ATCGAGGCGG GACGCATGCA GATTCACATG CAACCCACCG ATGTCGCGTC GTTCACGGCC
GAACTCGCTT CACTGTTCCA GTCCGCGATC GAGGCGGCCG GCCTGCGGCT CGAAGTGGAG
ATTCCGGCCG CACCCGTGGT CGTGCAGCTC GACCGCGAGA TGTGGGAAAA GGTCGTGATG
AACCTGCTGT CGAACGCGTA CAAGTTCACG TTCTTCGGCA CGATTCGCGT CGCGGTTCGC
GTGGTTGCCG GCGCCGGTGT CGAGGTCAGT GTGACGGATA GCGGCATCGG TATTGCCGAG
GAAGAAGTGC CGCGCCTCTT CGAACGCTTT CATCGCGTGG CGGGCGCGCC GGGACGCTCG
GTCGAAGGCA GCGGCATCGG GCTCGCGATG GTGCAGGAAC TGGTGAAGTT GCACGGCGGC
ACGGTGCGGG TGGACAGTGC GCTCGGCGAA GGCGCGTGCT TCACTGTCTC GCTGCCGCAC
GGCGCCGTGC CGGCCCAGCC CGATGAAGAA TCCGTGCATG CCGCCATGAG CAGGCACGCG
CGCACCTATG TCGATGCCGC GTTGCGCTGG AGTCCCGAGA ACGAGATCGT CGCCGACGCA
CCGGCCGAGA CGGCACTGGC CGGCGCGGCG CCGCCCATAG CCGCGCCCGT CGCCGCCGCG
CGGCTGCTGG TCGTCGACGA CAACGCGGAT CTGCGCGAGT ACATGAGCCG TATCCTGCGC
GCGGCGGGCC ACGAGGTGCG GCTTGCCACC GACGGCCAGG CCGCGCTCGA AGCCGCGCGG
CAGGAGCGCC CCGATCTCGT GCTCTCCGAC GTGATGATGC CGCGCCTCGA CGGCTTCGGC
CTGCTGCGCG CGTTGCGCGC CGATCCGGAG TTGCGCGATA CGCCGGTGCT GATGCTGTCC
GCCCGCGCGG GCGAGGAAGC GCGCGTGGAC GGCATCGAGC ACGGTGCCGA CGACTATCTG
ACCAAGCCCT TCTCGGCGCG CGAACTGCTG GCCCGCGTGT CGGGCAACCT GCAACTCGCG
CGCCTGCGCC GCGAGACCGA GACGAAGCTG CGCGAAGAAT CGCGCACTCT GGAGATTCTC
AATCGCGTCG GCTCGACGGT GGCGGCCGAA CTCGATCTGA ACCGCGCGGT GCAGATCGTG
ACCGACGCGG CCACCGAACT GACCGGCGCC GCGTTCGGTT CGTTCTTCTA CAACGTGCTC
GACGATAAGG GCGGCAGCTA CATGCTTTAC ACGCTGTCCG GCGTGCCGAA GGAAACCTTC
GGGCAGTTTC CGATGCCGCG CAACACGGCG GTGTTCGCGC CTACGTTCAT GGGCGAAGGC
ATCGTTCGTG TCAGCGACAT CACGCAGGAT CCGCGCTATG GCCACAACGC GCCGCATCGC
GGCATGCCGG AAGGTCATCT GAAGGTGCGC AGCTATCTGG CCGCGCCCGT GCAGTCGCGC
AGCGGTGAAG TGGTCGGCGG GCTGTTCTTC GGTCATCCGG AGCCCGGCGT GTTTACCGAA
CGCGCCGAGC GGATCGTGGC CGGCGTCGCC GCGCAGGCCG CCATTGCCAT CGACAACGCG
CGTTTGTACC AGGCCGCGCA AACCGAAATC GCCGAGCGCA CCAAGGCCCA GAGCGCGCTG
CACGATCTGA ACGAAACGCT GGAGCGCCGC GTGATCGAGA CGGTGGCGGA CCGCGACCGT
CTGTGGGAAT TGAGCGAGGA TCTGCTGGTG GTGGCCGATA TCGAAGGCCG CTTGCAGCGC
GTGAGTCCGT CATGGAGCAA CGCGCTCGGT CACAATACGC ATTGGCTGAT GTCGCGTTCC
TATGTCGACC TGGTTCACCC GGATGATGTA GAGGTGGTCC GCGCCCATCT GGCCGAACTG
CGGCGCACGG GCGTGCCGGT GCGTTATGAA AACCGCTTCA AGCGGATCGA CGGCACGTGG
CGCTGGGTTG CGTGGACGCT CGCGCTCGAT CCCGACACGG CGCGCATTCA CGGCGTGGGC
CGCGACGTCA CGGCCGACAA GGAAACCACC GAGGCCTTGC GGCACGCCGA AGAAGCGCTG
CGCATGGCGC AGAAGATGGA AGCGATCGGC AAGCTCACGG GCGGCGTCGC GCACGACTTC
AACAACCTGC TGCAGGTGAT AGGCGGCAAT CTGCAACTGC TGGCGAAAGA CGTCGCCGGT
TCCGAGAAGC CCGAGCAGCG CGTGCGCAAT GCGCTGGCAG GCGTGGCCCG CGGCGCGAAC
CTCGCCTCGC AACTGCTGGC GTTCGGGCGG CGTCAGCCGC TGGCGCCGAA GGTCGTCAAT
CTGGGCCGCT TCGTGCGAGG GCTCGACGAC ATGCTCAGAC GCGCGCTTGG CGACGGCGTC
GAAATTGAAA CGATCGTCTC GGGCGGCTTG TGGAATACGC TGGTCGATCC GTTCCAGGTC
GAGAACGCGC TGCTGAATCT GGCAATCAAC GCGCGCGACG CCATGAACGG GCATGGCAAG
CTCACCATCG AAGCCGGCAA TGCCGCGCTC GACGACGCCT ACGCCAAGCG CAACGCCGAG
GTCACGCCGG GGCAGTACGT GATGCTGGCG GTCACCGACA CGGGTGCCGG GATGCCGCCG
GAAGTGCGCG AGCGCGTGTT CGAGCCGTTC TTTACGACCA AGCCCGAAGG TCAGGGCACG
GGTCTCGGCT TGAGCATGGT GTATGGCTTC GTCAAACAGT CCGGCGGCCA CGTGAAGATT
TACAGCGAAG AGGGTCACGG CACGACGATT CGCATCTATC TGCCTCGGGT GCGCGAGCAG
GAAGACCTCG AAACGAATAT CGACGCCGGT CCCGCCAAGG GCGGCACGGA AACCGTTCTG
GTGGTCGAAG ACGACGAGGA AGTGCGCACC ACGGTGGTCG AAATGCTTTC CGATCTCGGC
TACCGTGTGC TGAAAGCGAA AGACGCGCAA AGCGCGCTCG CGATCGTCGA AAGCGGCGTG
CCGATCGACG TGCTGTTCAC CGACGTGGTG ATGCCCGGCC CGCTGCGCAG CACCGAACTC
GCCCGCAAGG CGCGCGAACG CTTGCCTGCG ATCGCGGTGC TGTTCACGTC GGGCTATACG
GATAACGCGA TCGTGCATTC CGGGCGACTC GACGAAGGCA TTGAACTGCT CAGCAAGCCC
TACACGCACG AAGCGTTGGC GCGCAAAATC CGCTACGTGC TGCAAACGCA GAATCCGCAG
GCGGCCGAAA TCGCCGAGGC CGGCCAGCAC CTTCTCGATA TCGATCCGCC AGCCATGCCG
GATAGCGCCG ATAGCGCCGA TAGCGTCGCC GCTCAGCCGC GGCCGCGGAT TCTGCTGGTG
GAGGACGACG AGCTGGTTCG CGCGAGCACC GCTGAATTGC TGCGCATGTT CGAATTCGAC
ATTCTGGAGG CCGAAGGTGA GCACGACGCA AAGCAGATTC TCAGCGAGCA TGCGATCAGC
GTAATGCTGA CCGACGTGGG GCTGGCGGGC AAGTCGGGTG TCGATCTCGC GCTGGAGGTG
TGTGCCGGGC GGCCCGATCT GCGCGTGATC TTTCTGACCG GCTACGACCT CGTGCTGACC
CCGGAGCAGC GCAAGGTTTT GCCGCACGCT ATCCTGCTGC GCAAGCCGTA CGATCTGCTC
GATCTCATCG ATGCGCTGAA AACGCCGCTG CGCTAG
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| Protein sequence | MSRRVEEIAL KEPDRFVSDE SPDGFDAPSF LAGGGELGAL IRAYDWTQTA LGPPENWPQG
LKIAIRIMLT SRQPIWIGWR DELLYFYNDP YKSIIGGKHP AALGQPTKVV WREIWTDIEP
LLNTALAGAE GIFVEQKLLI MERNGFPEET YYTFSYSPIP GDDGEPGGII CANSDGTAQV
VGERQLALLK ELAAVSPNGR DWRHACELSA RALQANPQDL PFALLYAAEP GSDTVALVGA
CGIEPGHAAA PQTMKLDGEA LWPVVDVFDT QAPRLVGDLT QRFGTALPSG PWHIPPQQAV
ILPVSPGSES TQTVVLVAGL NPCRLFDDAY RSFLNLAAGQ IGAAIGYARA YEEERRRAEA
LAEIDRAKTT FFSNISHEFR TPLTLMLGPL EELLAKPQLA AGGDNARVGS DIEDRALIEI
THRNGLRLLK LVNALLDFSR IEAGRMQIHM QPTDVASFTA ELASLFQSAI EAAGLRLEVE
IPAAPVVVQL DREMWEKVVM NLLSNAYKFT FFGTIRVAVR VVAGAGVEVS VTDSGIGIAE
EEVPRLFERF HRVAGAPGRS VEGSGIGLAM VQELVKLHGG TVRVDSALGE GACFTVSLPH
GAVPAQPDEE SVHAAMSRHA RTYVDAALRW SPENEIVADA PAETALAGAA PPIAAPVAAA
RLLVVDDNAD LREYMSRILR AAGHEVRLAT DGQAALEAAR QERPDLVLSD VMMPRLDGFG
LLRALRADPE LRDTPVLMLS ARAGEEARVD GIEHGADDYL TKPFSARELL ARVSGNLQLA
RLRRETETKL REESRTLEIL NRVGSTVAAE LDLNRAVQIV TDAATELTGA AFGSFFYNVL
DDKGGSYMLY TLSGVPKETF GQFPMPRNTA VFAPTFMGEG IVRVSDITQD PRYGHNAPHR
GMPEGHLKVR SYLAAPVQSR SGEVVGGLFF GHPEPGVFTE RAERIVAGVA AQAAIAIDNA
RLYQAAQTEI AERTKAQSAL HDLNETLERR VIETVADRDR LWELSEDLLV VADIEGRLQR
VSPSWSNALG HNTHWLMSRS YVDLVHPDDV EVVRAHLAEL RRTGVPVRYE NRFKRIDGTW
RWVAWTLALD PDTARIHGVG RDVTADKETT EALRHAEEAL RMAQKMEAIG KLTGGVAHDF
NNLLQVIGGN LQLLAKDVAG SEKPEQRVRN ALAGVARGAN LASQLLAFGR RQPLAPKVVN
LGRFVRGLDD MLRRALGDGV EIETIVSGGL WNTLVDPFQV ENALLNLAIN ARDAMNGHGK
LTIEAGNAAL DDAYAKRNAE VTPGQYVMLA VTDTGAGMPP EVRERVFEPF FTTKPEGQGT
GLGLSMVYGF VKQSGGHVKI YSEEGHGTTI RIYLPRVREQ EDLETNIDAG PAKGGTETVL
VVEDDEEVRT TVVEMLSDLG YRVLKAKDAQ SALAIVESGV PIDVLFTDVV MPGPLRSTEL
ARKARERLPA IAVLFTSGYT DNAIVHSGRL DEGIELLSKP YTHEALARKI RYVLQTQNPQ
AAEIAEAGQH LLDIDPPAMP DSADSADSVA AQPRPRILLV EDDELVRAST AELLRMFEFD
ILEAEGEHDA KQILSEHAIS VMLTDVGLAG KSGVDLALEV CAGRPDLRVI FLTGYDLVLT
PEQRKVLPHA ILLRKPYDLL DLIDALKTPL R
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