| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4482 |
|---|
| Symbol | |
|---|
| ID | 4006450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4874081 |
|---|
| End bp | 4875286 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637949663 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_561001 |
|---|
| Protein GI | 91785795 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase |
|---|
| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000221745 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000015212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA AGCCTTCCGA AACCGCCTCC GGCACCGCCA GTTGGACTTC CGACGACGAG
CGCTGGGAAG CCGTCACACG CCGCGAGCCG CAAGCCGACG GCGCGTTCTT CTATGGCGTC
AAAACGACCG GCGTGTTCTG CCGGCCGTCG TGCGCGTCGC GCCAGCCGCG CCGCGAGAAC
GTCGCGTTCT TCACCGACGC CGCCGCCGCG CGCGCTGCGG GCTTTCGCGA TTGCAAGCGC
TGCCAGCCCG GCGGTCTGCC GCGCGAGCTG GAAATCGTGA ACCGCGCATG TGCCGCGCTC
GACGCCGACC GGCAACAACG CCTCACGCTC GCCCAGTTGA GCGACGCCGT GCACGTCAGC
CCGTTTCACC TGCAGCGTCT GTTCAAGCGC GTGGTGGGCG TGTCGCCGCG TCAATATCAG
GCCGCGCAAC GGGGCGCCGC GCTGCGCGAC GCACTCCAGT GCGGCTCGGA CGTCACTCGC
GCCACGCTCG ACGCGGGCTT CGGCTCGCCG TCGCGAATGT ACGACAGCGC GCCGGCCGAG
CTCGGCATGG CGCCGTCCGC GTATCGCCGC AAGGGCGCGG GGCTTACCGT GCGCTACGCG
AGCGCGTCGA CGCCGCTCGG CTTCGTGCTC GTCGCGGCCA CGGAGAGGGG CATCTGCAAG
ATCGGTTTCG GCGACGACAC CGCCACGCTC GCCGACGACC TGCGCAGCGA ATTTGCCAAC
GCCGACCTGT TGGAAGATAC CGTCCACCTC GCGCCGTTCA TCGCGCAAAT CGACGCCTAT
CTGCGGGGCA CCCGCCAGAA CTTCGATCTA CCGCTCGATA TCGCGGCGAC GGCATTCCGG
CAGCGTGTCT GGGAGGCGTT GCGGCGCATC CCCTACGGCG AGACGCGCAG CTATTCGCAG
ATCGCCGAAG CGGTGGGCAC GCCGCGTGCC GTGCGCGCGG TAGCCAGCGC GTGCGCGACG
AACCCGGTGG CACTGGCGAT TCCGTGTCAT CGCGTGGTGG CAAAGGGCGG GGCGCTGGCG
GGATATCGCT GGGGGCTGCC GCGCAAGGCT GCGCTGCTCG ACAACGAGGC ACAGCATGCC
GGCGTTTTTT CGCGCGGCCC GATCACGCGC GACGAACGCG TCCTTGCCGA TGCCGATGCC
GGCGTCGGCA ACGGCAACGG CAACGGCAAC GAAACCACCA CCACCAAACT GGACCACGCC
GCGTGA
|
|---|
| Protein sequence | MNRKPSETAS GTASWTSDDE RWEAVTRREP QADGAFFYGV KTTGVFCRPS CASRQPRREN
VAFFTDAAAA RAAGFRDCKR CQPGGLPREL EIVNRACAAL DADRQQRLTL AQLSDAVHVS
PFHLQRLFKR VVGVSPRQYQ AAQRGAALRD ALQCGSDVTR ATLDAGFGSP SRMYDSAPAE
LGMAPSAYRR KGAGLTVRYA SASTPLGFVL VAATERGICK IGFGDDTATL ADDLRSEFAN
ADLLEDTVHL APFIAQIDAY LRGTRQNFDL PLDIAATAFR QRVWEALRRI PYGETRSYSQ
IAEAVGTPRA VRAVASACAT NPVALAIPCH RVVAKGGALA GYRWGLPRKA ALLDNEAQHA
GVFSRGPITR DERVLADADA GVGNGNGNGN ETTTTKLDHA A
|
|---|
| |