Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A4412 |
Symbol | |
ID | 4002028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 65920 |
End bp | 67293 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637945237 |
Product | Fmu, rRNA SAM-dependent methyltransferase |
Protein accession | YP_556640 |
Protein GI | 91781434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.658908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATC TCGCGCCCGA GTCGCTCGGC TTCGCGCTCG ACTGCGCGGG CCAGGCTGTC GGCGCAGTGC GTCTCGGCGC AGCGTTGCCG GCCGCGCTGC AATCCGTCTT CGTGTCCGCG CCCGAGGGTA GCGTCGCGGC CGCGCGCGGC GCGGTGCAGG ACATCGCGTA CCGCACCATG CGGCGTCTGG CGACCGCCGA GTGGCTGATC GCGAAGCTGG TGAAAAAGGC GCCGCCGCCG CACGTCGGTC ATGTGCTCGC CTGTTCGCTG GCCTTGCTTG TCGACGACGA AGCGAACGCA GCCTACGCGC CGTTCACGGT GGTCGATCAG GCGGTGAGCG CGATCGCCGC GCGTCGTGAA TTCGCTTTTG CCAAGGGGCT CGTCAATGCC GTGCTGCGCA CTTTCCTGCG TGAGCGCGAG ACGCTGTTGA GCGCCGCGCA AGCCGACGAA GTGGCGCGCT GGAACTACCC CGCCTGGTGG ATCGATGCGG TGAAGCGCGC ATGGCCCGAC GCATGGCAGT CGGTGCTCGC CGCCGGCAAC ACGCAAGGTC CGCTGACGCT GCGCGTGAAC GCGCGCCGTT CGACTGTGGA CGCCTACCTG CAACTGCTGC AGAACCAGCA CATTGCCGCA AGCAAGGCGG GAGACTACGC CGTCAAGCTC GCCACGCCGA TGCCCGTTGA CCGCATTCCG GGCTTCACCG ACGGTGTCGT TTCGGTGCAG GACGCCGGCG CGCAACTCGC CGCGCAACTG CTCGGCGTGC ACGACGGTAT GCGCGTGCTC GACGCCTGCG CCGCGCCCGG CGGCAAGACC GGCCATCTGC TCGAACTGGC CAATCTTCAG CTCGTCGCGC TCGAAAGCGA CGCCTCGCGT GCGCGCCGGA TCGGCGAGAA CCTGCAGCGC CTCAAGCTCG AAGCGGAAGT GCGGATCGGC GACGCCGGCA CGCCCGCGAA ATGGCACGAC GACATCGACC AGCCATTCGA CCGCATTCTC GCCGACGTGC CGTGTTCGGC GTCGGGCATC GTGCGGCGCC ATCCGGACAT TCGCTGGCTG CGCCGCGCGT CCGACATTCC CGCGCTGGTC GCCGAGCAGC GCCGCATTCT CGACGCGCTG TGGCCGCTCG TGAAACCAGG CGGCGAGTTG CTCTACGTTA CGTGTTCGAT CTTTCCCGAA GAAGGCGAGT TGCAGGCGCA GTGGTTTGGA AACAAGTATC AGGATGCGGT ACGATTGGAC GCGCCGGGGC AGCTGTTGCC TTCAGTCGCT CGCGCGCCCG CCGACGCATC GGCCGGTTCC CATGCCGGAC AATCCGCTGA AGACAGCGCC GGCGCGAACT CAGACCACGA CGGATTCTTC TACGCGCGCT TCCAGAAACG GTGA
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Protein sequence | MLHLAPESLG FALDCAGQAV GAVRLGAALP AALQSVFVSA PEGSVAAARG AVQDIAYRTM RRLATAEWLI AKLVKKAPPP HVGHVLACSL ALLVDDEANA AYAPFTVVDQ AVSAIAARRE FAFAKGLVNA VLRTFLRERE TLLSAAQADE VARWNYPAWW IDAVKRAWPD AWQSVLAAGN TQGPLTLRVN ARRSTVDAYL QLLQNQHIAA SKAGDYAVKL ATPMPVDRIP GFTDGVVSVQ DAGAQLAAQL LGVHDGMRVL DACAAPGGKT GHLLELANLQ LVALESDASR ARRIGENLQR LKLEAEVRIG DAGTPAKWHD DIDQPFDRIL ADVPCSASGI VRRHPDIRWL RRASDIPALV AEQRRILDAL WPLVKPGGEL LYVTCSIFPE EGELQAQWFG NKYQDAVRLD APGQLLPSVA RAPADASAGS HAGQSAEDSA GANSDHDGFF YARFQKR
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