| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4390 |
|---|
| Symbol | |
|---|
| ID | 4005146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 88701 |
|---|
| End bp | 90095 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637945260 |
|---|
| Product | major facilitator superfamily (MFS)muropeptide transporter |
|---|
| Protein accession | YP_556662 |
|---|
| Protein GI | 91781456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00901] AmpG-related permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACC CGCCGCACGA GGCGCCTGCA CTTACCGCTC ACGAAGAACA TCCCGGCTGG
CGCGCGTTCC TGAATACGCG CATGCTGATC TGCGTCTTTC TCGGCTTTAC GTCGGGATTG
CCGCTGTTCA CGCTCGTCTA TCTGGTGCAG GCGTGGTTAC GCTCCGAAGG CGTCAATCTG
AAGGAAATCG GCCTGTTTGC GCTGATCCAG TTCCCGTACA CCTGGAAATT TATCTGGGCG
CCGCTAATGG ACCGCTACGT GCCGCGCTTC CCCGGCTGGC GTCCGGGCAG ACGGCGCGGC
TGGATGCTGG TCACGCAGAT CCTGGTGGCC GGCGCCATTG CAACCTTAGG GTTCGTGTCA
CCCAAAGAGT CGATCTGGAC GGTGGCCGCT CTGACGGCGC TGGTCGCGTT TTTCGGTGCC
AGTCAGGACA TCGTGATCGA TGCCTACCGG CGTGAATTGC TGAGCGATAC GCAGCAGGGA
CTCGGCAACG CGGTGCACGT GAACGCTTAC AAGATCGCGG CGCTCGTACC CGGTTCGCTC
GCGCTGATCC TGTCCGACCA TTTGCCGTGG AGCACCGTTT TCATCGTGAC GGCCGCGTTC
ATGCTGCCCG GCATGGTCAT GACGCTGGTG GTGCACGAGC CCGCGGTTCA CGGCACGCCG
CCCAGGAACC TGCGCGAGGC GATCGTGCAG CCATTCAAGG AATTCATTCA GCGCGACGGC
TGGCGTGGCG CACTGTTCGT GCTCGGTTTC ATCTTTCTGT ACAAGCTCGG CGACACGATG
GCGACCACGC TGTCCACCTC GTTCTTTCTC GACATCGGTT TTTCGCGCAC GCAGATCGGC
GTGATCGCGA AAACCACGGC GTTCGGCGCG AGTCTGGCGG GCGGGATCGT CGGCGGGATC
TGGCTGATGA AAATCGGCAT TGGCCGGGGC TTGTGGATCT TCGGCATCCT GCAGATGGTG
TCGACGCTCG GCTTCGCGTG GCTCGCGCAT CTCGGACCGG CCTCGCCAGG TCTCGTCGCG
ATTTACGACA TCGCCGTCTG GCTGAGCCAG GGCACGACGA AGCTGCTCGC GCTGGTGGGC
GTCGATTGGG CCGTTCAGCT CGAGCCGCGT TCGGTCGCGC TCGCGCTCGT GTACGGCTTC
GAGACCTTCG CCACCGGTTT GACGATGGCG GCCTTCACCG CCTATATCGC CAGCACCACG
GATCCGCGCT ACACGGCCAC CCAGTTCGCG CTCTTCACGA GCCTCGCTTC GGTGCCGCGC
ACGCTGGCTT CCGCGGCAAG CGGCTATGTG GTCGCGCAGA TCGGCTGGTT CGATTACTTC
ATCGTTTGTA CCGCGCTGGC GTTGCCCGGC ATGGTGCTTC TGCTGCGCAT TGCGCCGTGG
AGGGCGCAGT CGTGA
|
|---|
| Protein sequence | MSNPPHEAPA LTAHEEHPGW RAFLNTRMLI CVFLGFTSGL PLFTLVYLVQ AWLRSEGVNL
KEIGLFALIQ FPYTWKFIWA PLMDRYVPRF PGWRPGRRRG WMLVTQILVA GAIATLGFVS
PKESIWTVAA LTALVAFFGA SQDIVIDAYR RELLSDTQQG LGNAVHVNAY KIAALVPGSL
ALILSDHLPW STVFIVTAAF MLPGMVMTLV VHEPAVHGTP PRNLREAIVQ PFKEFIQRDG
WRGALFVLGF IFLYKLGDTM ATTLSTSFFL DIGFSRTQIG VIAKTTAFGA SLAGGIVGGI
WLMKIGIGRG LWIFGILQMV STLGFAWLAH LGPASPGLVA IYDIAVWLSQ GTTKLLALVG
VDWAVQLEPR SVALALVYGF ETFATGLTMA AFTAYIASTT DPRYTATQFA LFTSLASVPR
TLASAASGYV VAQIGWFDYF IVCTALALPG MVLLLRIAPW RAQS
|
|---|
| |