| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4373 |
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| Symbol | dapF |
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| ID | 4005532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 106734 |
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| End bp | 107597 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637945277 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_556679 |
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| Protein GI | 91781473 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AATTCACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC
TACACCCAAC CGGTCAACCT GACGCCGGCG CAGGTGCGCG CGCTCGCGGA CCGGCATTTC
GGCGTCGGCG CCGACCAGTT GCTGCTGGTC GAAAAGCCCA CGGTGGCCGG TGTCGATTTC
AGATATCGCA TCTTCAATTG CGACGGCGGC GAAGTGGAGC ATTGCGGCAA CGGCGCGCGC
TGCTTCGTCA AGTTCGTGCG CGAGCGCGGC CTCACCGATC AACGCAGCGT GCGCGTGCAG
GTGCAGAAGG GCACCATCAC GCTGACCATG CAGGAAAACG GCGAAGTGCT GGTCGACATG
GGCACGCCCG TGTTCGACCC GGAGCGCGTG CCGTTCGCCA CCAAAGGCCT CGAAGGCCGC
CGCGAGGGAG CGGACACGCT CTGGCCGCTC GACGTGAGCG GCACGACACG GTGGATTTCG
GTGGTCTCGA TGGGCAATCC GCACGCCGTG CAGGTCGTCG GCGACGTCGA AGCGTTCCCG
GTGCTGGCCG AAGGCCCGGT GATCGAGCGT CATGCGCGTT TTCCGCAGCG GGTGAACGCG
GGCTTCATGC AGATAGTCGG CCGCAATGAA ATCAGGCTGC GCGTGTACGA GCGCGGCGCG
GGTGAAACGC TGGCGTGCGG CACGGGCGCA TGCGCGGCGG TCGCGGCCGG CATCCGGCGC
GGGCTGCTCG ACTCACCCGT GCGCGTGCAC ACGCACGGCG GCGACCTGAC CATCTCGTGG
GACAGCACGC GAGAAGGCGA ACCGCTACTC ATGGCCGGAC CGGCCGTGAC CGTTTTCGAA
GGCGAGATCG AGCTGCCCGA CTGA
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| Protein sequence | MKLKFTKMHG AGNDFVVLDG YTQPVNLTPA QVRALADRHF GVGADQLLLV EKPTVAGVDF
RYRIFNCDGG EVEHCGNGAR CFVKFVRERG LTDQRSVRVQ VQKGTITLTM QENGEVLVDM
GTPVFDPERV PFATKGLEGR REGADTLWPL DVSGTTRWIS VVSMGNPHAV QVVGDVEAFP
VLAEGPVIER HARFPQRVNA GFMQIVGRNE IRLRVYERGA GETLACGTGA CAAVAAGIRR
GLLDSPVRVH THGGDLTISW DSTREGEPLL MAGPAVTVFE GEIELPD
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