| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4348 |
|---|
| Symbol | |
|---|
| ID | 4002132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 138005 |
|---|
| End bp | 139396 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637945302 |
|---|
| Product | basic amino acid transporter |
|---|
| Protein accession | YP_556704 |
|---|
| Protein GI | 91781498 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00909] amino acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.190712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGT TTCGCAAGAA GAGCGTCGAG CACATGATCG CCGCAAGTGC TCAGAACGCC
GGTTTGAAGA AAGCGCTCGG CGCGCTCGAT CTGACCTTCC TCGGCGTCGG CGCCATTATC
GGCACCGGTA TTTTCGTGCT GACCGGCACG GGCGCCGTGC AGGCCGGCCC GGCGCTGATG
ATCTCGTTCC TGATCGCGGC GCTCGCCTGC GGCTTCGCCG CCCTCGCCTA CGCAGAATTT
GCCTCGACGA TTCCGGTGGC GGGATCGATC TACACGTACT CGTATGCGAC GCTCGGCGAA
CTGGCCGCAT GGATCATCGG CTGGGACCTG ATGCTCGAAT ACGGGCTTGC CACCTCCGCT
GTCTCGGTGG GCTGGTCGGG TTATCTGCAA TCGTTGCTGT CGGGCTTCGG CGTGTCCTTG
CCGGTTGCGT TGACGGCGGC GCCAGGTGCG TTGCCAGGTC ACGACACGCT CTTCAACCTG
CCCGCGTTCC TCGTGATGAT GGCGATCACG GCGCTGTTGT CGTTCGGCGT GCGCGAGTCG
GCGCGGATCA ACAACATCAT GGTCGCGATC AAGGTGATCG TGGTGTTGCT GGTCATCTGC
GTGGGCGTCT TTCATGTGAC GCCGGCCAAC TGGCATCCGT TCATGCCGAA TGGCTGGAAC
GGCGTGTTCG GCGCGGCGGC GGTGATGTTC TTCGCGTTCA TCGGTTTCGA CTCCGTGTCG
TCCGCGGCGG AAGAGGTGAA GAATCCGAAG CGCGATCTGC CGATCGGAAT CATTGCGTCG
CTGGGCGTTT GCGCGGTGTT GTATGTGGCG GTGGCCGCCG TCGTCACCGG CATCGTGCCG
TCGGCGCAGT TCGCGAATAT TTCGCACCCG GTCTCGTACG CGTTGCAGGT TGCGGGGCAA
AAGTGGGTGG CGGGGTTTAT CGACCTCGGC GCCGTGCTGG GTATGTTGAC GGTGATTCTG
GTGATGGCTT ATGGCCAGAC CCGGGTGATT TTCGCCATGT CGCGCGACGG GTTGCTGCCG
GCGCGGCTTT CGCGGGTGCA TCCGCGGTTC GCTACGCCGT TTTTTACTAC GTGGCTCGTG
GGGATTTTCT TTGGATTGAT CGGGGCGGTG GTGCCGTTGA ATGTGCTGGC CGAGTTGATC
AATATCGGCA CGTTGGCCGC GTTTTCGATG GTGTCGATTG CGGTTCTCGT TTTGCGGAAG
ACGCATCCTG AATTGCCGCG GGCGTTCCGG TGTCCTGGGG TGCCGGTTGT GCCGGTGTTG
GCGGTTGCTT CCTGCCTTTT CCTGATGATT AATCTTCAGG CTGTTACGTG GGTGGCGTTT
GTGGTTTGGT TGCTCGTTGG GATGGTTGTT TATTTTGGGT ATTCGCGGAG GCATTCCAGG
TTGAGCAGCT AA
|
|---|
| Protein sequence | MSLFRKKSVE HMIAASAQNA GLKKALGALD LTFLGVGAII GTGIFVLTGT GAVQAGPALM
ISFLIAALAC GFAALAYAEF ASTIPVAGSI YTYSYATLGE LAAWIIGWDL MLEYGLATSA
VSVGWSGYLQ SLLSGFGVSL PVALTAAPGA LPGHDTLFNL PAFLVMMAIT ALLSFGVRES
ARINNIMVAI KVIVVLLVIC VGVFHVTPAN WHPFMPNGWN GVFGAAAVMF FAFIGFDSVS
SAAEEVKNPK RDLPIGIIAS LGVCAVLYVA VAAVVTGIVP SAQFANISHP VSYALQVAGQ
KWVAGFIDLG AVLGMLTVIL VMAYGQTRVI FAMSRDGLLP ARLSRVHPRF ATPFFTTWLV
GIFFGLIGAV VPLNVLAELI NIGTLAAFSM VSIAVLVLRK THPELPRAFR CPGVPVVPVL
AVASCLFLMI NLQAVTWVAF VVWLLVGMVV YFGYSRRHSR LSS
|
|---|
| |