| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4339 |
|---|
| Symbol | |
|---|
| ID | 4002141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 148298 |
|---|
| End bp | 149419 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637945311 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_556713 |
|---|
| Protein GI | 91781507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGT TCCAGCGCCG CTGCAGCGCG GCCCGCACAA TGAAAAAATC GACCCAGCGC
CGTCCGACCA TGACCGACAT CGCCAAGCTC ACTGGCGTGT CGCAATCGAC AGTCTCGCTC
GTGCTGAACA ACGCGACCGG CGCGAAGTTC TCCGAGGCCA CCCGCAACAA GGTGCTGAAA
GCCGCGCACG ACCTCGGCTA CCGGCTGTCG CTGCGCGAGC CGGTATCGGC TTCGAGCGAC
GAGCGCAATC TGATCGTCTA TCTGGCCGAC GAAATTTCCA CGAGTCCGCA TCCGGTCGTC
AACGTCGACG GCGCGCGTGA CGCGGCCTAC GCGAGCGGCA AGATGCTGGC GGTCTATTCG
ACGCACGGCA ACGCCGACAT CGAAAAGCAG GTGCTGGACG CCACGCTGTC GAATCCGCAC
GTGTTCGGCG TGATTTACGC GACCGTCTAT ACGCGCAAGG TGACGCCGCC GGTGGCGCTC
TCGCAGGTGC CGACCGTGCT GCTGAATTGC TATACGGGCG AAGGCGGGTT TTCGTCGGTG
GTGCCCGCTG AAGTGGCCGG CGGTCACCTG GCGACCGACT ACCTGTTGCA GGCCGGACAC
CGGCGGATCG GCTATATCAA CGGCGAACCC TGGCAGGATG CGTCGAAAGA CCGGCTCAAA
GGCTACCGCA CCGCGCTCGC CACCGCCGAC CTGCCTTTCG CGCCGGAAAT GGTGCGCGAC
GGCGACTGGA GTTCGGGCCT CGGCTTTGAA CTGACGCTCT CGCTGATGCG CGAGCCCAAT
CCACCGACCG CGATTTTCTG CGCCAACGAC CTGACCGCCA TCGGCGCCAT CGAAGCCCTG
AAACAACTCG GCCTGCGCGT GCCCGAAGAC GTCTCCGTGC TCGGCTACGA CGACCAGGAA
ATCGCCCGTC ATACGCATCC GCCTCTCTCG ACCGTCGTGC TGCCGAACTA CGAACTGGGG
CGCTGGGCCG TCGAAACCCT GCTGCAGGAA GAACACAATC GCGCCGCCGG CGCGCCGGTT
CGGCATCGCA TGGTCAAGCT CGACGGTCCG CTTGTCGAAC GCGCTTCGGT CAGGGTAATT
ACCGAGGCAA AAAAGCCAAT AACTAATATT ATTAGTGATT GA
|
|---|
| Protein sequence | MPQFQRRCSA ARTMKKSTQR RPTMTDIAKL TGVSQSTVSL VLNNATGAKF SEATRNKVLK
AAHDLGYRLS LREPVSASSD ERNLIVYLAD EISTSPHPVV NVDGARDAAY ASGKMLAVYS
THGNADIEKQ VLDATLSNPH VFGVIYATVY TRKVTPPVAL SQVPTVLLNC YTGEGGFSSV
VPAEVAGGHL ATDYLLQAGH RRIGYINGEP WQDASKDRLK GYRTALATAD LPFAPEMVRD
GDWSSGLGFE LTLSLMREPN PPTAIFCAND LTAIGAIEAL KQLGLRVPED VSVLGYDDQE
IARHTHPPLS TVVLPNYELG RWAVETLLQE EHNRAAGAPV RHRMVKLDGP LVERASVRVI
TEAKKPITNI ISD
|
|---|
| |