Gene Bxe_A4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4100 
Symbol 
ID4003365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp398490 
End bp399773 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content65% 
IMG OID637945551 
Productmajor facilitator superfamily metabolite/H(+) symporter 
Protein accessionYP_556951 
Protein GI91781745 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.41549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTT CGATCGACCT GGCAGTCGTA GTAGCGCGCC CGTATCGCGT GTTCATCGCC 
ACATGGGCGG GCTGGATGCT GGACGGTTTC GACAACGCCA TCTACATCTA CGTCATCGTG
CCCGCGTTGA CCGAGTTGCT GCCCAAAAGC GGCTTCGTGG CCGATCACGC GCATATTGCA
CGGCTCGGCG GCTTGATGTT CAGCCTCTTC ATGCTCGGCT GGGCCTGCTC GATGTTCTGG
GGCTGGTGCG CGGACCGATT CGGCCGCGTC CCTACCATGT GCGCGACCAT CCTCATTTAT
TCGATCTTCA CCGGCGCTTG TGGGCTCGCG CCCGGCATCG TATCGTTCGC GATCTTCCGT
TTCCTGACGG GTTTCGGCAT AGGCGGCGAA TGGGCCGCCG GCGCGCCGCT GCTTCAGGAG
TCGGTGCCAG AGCATCTGCG CGAGCGTTTG TCGGGCTGGC TGCACACCGG CACGCCGATC
GGCTTTCTGC TGGCTTCCGC CGCCGCGCTG GTGATTCTGC CGCTGGGCGG CTGGCGGGTT
CTGTTTCTGA TCGGCAGCGC ACCCGCGTTG CTGACCATCT GGCTGCGGCT CGGCGTACCG
GAGTCGCGCC GCTGGCAGGA ACAGCGTCGC GTGCAGGGGC CGCGTGCGCG TGTGCGCGAC
CTGTTCGCGC GCGACATGGC GCGCACCACG TGGTCGGCCG CGCTGATGAT GACGTGCCTG
ATATTCGGCC TGTGGTCGTC GACCTTCTGG ATTCCGACGC TCGTGATCAC GTGGCAGCGC
GCGGGCGGCG CATCCGTCGC CGATGCGCAG TATCTGGGCT CGCTGAGCGG CTTGATCCTG
AGCGTCGGCA CGCTCGCCGG TTGCGTTGCG ATGCCGTGGA TCGTGCGCTG GATTCCGCGT
CGTAAATCGG TCGCCAGCGT GTTCTTCTCC GGCGCGCTGA TCTGCAATGT CGCCTCGTAC
TTCGGCATTG TGGTGTTGCT GAAAAGCCTG CCGCTATTCC TGATCACACT GCCGCTGCTC
GGCTTCTTCA CAAGCGGCGT GTTCTCGCTG TTCACGATCT GGCTGCCCGA AATGTTTCCG
ACGATGCAGC GCGCGCTCGG TTCCGGATTC GCCTTCAGCT TCGGCCGCGT CCTCGGCGCG
GCGGGACCGT CGATTGTCGG CGCGCTCGCG GCGATGTTCG GTTCCTATCC GCTCGCGATC
ACCGCGGTTT CGCTGATCTA TCTGGTCGGT CTGTTCTGCG TGAAGTGGGC GCCGGAAACC
GCGCACCGGG CATTGCGGCA GTGA
 
Protein sequence
MSSSIDLAVV VARPYRVFIA TWAGWMLDGF DNAIYIYVIV PALTELLPKS GFVADHAHIA 
RLGGLMFSLF MLGWACSMFW GWCADRFGRV PTMCATILIY SIFTGACGLA PGIVSFAIFR
FLTGFGIGGE WAAGAPLLQE SVPEHLRERL SGWLHTGTPI GFLLASAAAL VILPLGGWRV
LFLIGSAPAL LTIWLRLGVP ESRRWQEQRR VQGPRARVRD LFARDMARTT WSAALMMTCL
IFGLWSSTFW IPTLVITWQR AGGASVADAQ YLGSLSGLIL SVGTLAGCVA MPWIVRWIPR
RKSVASVFFS GALICNVASY FGIVVLLKSL PLFLITLPLL GFFTSGVFSL FTIWLPEMFP
TMQRALGSGF AFSFGRVLGA AGPSIVGALA AMFGSYPLAI TAVSLIYLVG LFCVKWAPET
AHRALRQ