| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4040 |
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| Symbol | |
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| ID | 4004322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 468148 |
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| End bp | 469770 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637945611 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_557011 |
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| Protein GI | 91781805 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGC ATCCGGATAC GTATTCGCCA ACCATGCCCA CTTTCCCTTC TTCGCCGGCC
GCCGACCATT CGAGTCTCCA TGACGAGGCC GTGCAGGCCT ATCAAGCCGG CCGCCATGAC
GCGGTGCGGA CACTCGCCGA GCGGATCCTG GCCGAGGATC CGGAGCATGT CGGCGCCATC
CACTTGCAAG GCCTGCTCGC GCTTGCGTCC GGCCACGCAC GAGAGGCGCT GCGCTCGCTC
GAACGCGCGA TCCAGATCCG GCCGGAGCCG ATCCTGTTCA ACACGCTCTA TGCGATTCGC
CTGAACCTCG GAGACTTCGC CGGCGCCGTG CAGAGTATCC GCCAGGGACT CGCGATCCAG
CCGGACTTTG CCGCGTTCCA CTACAACCTC GCGTTGACGC TGCAACATCT CGGTCATATC
GAGGACGCCG CGCTCGGCTA TCGGCGCACG CTCGAACTCG ATCCGGACAA CTCGGCGGCG
CATAACAATC TCGGCCGCGT TTGCGCGGAC CTCGGCGCAA TGGAAGAGGC CGGGCGGCAC
TACCGGCGCG CTATCGAGCT GTCGCCCGCC AACCTTGTCG CGCGCAACAA CCTCGGCATG
GCTTTGCTCG CGACCGGCCG CTACGACGAA GCGTGGCCTT ATTTCGAGGA CCGCTGGGTC
AGTTTCAAGC ACACCGATGG CCGGCCCGCG CCCGCGCCGG TGGAAGTGCC GCTGCCGCGC
TGGCCGGGCG CGGGCGTGTC CGTCGGCCAA GGCGCGCAAG CGGTGCAAAG CCTTCTCGTG
CTTCACGAGC AAGGCCTCGG CGACAGCTTG CAGTTCGTGC GCTATCTGCC GCTGGCGCTC
GCGCATTTTG CCCGGGTCGG TTATGTGTGC CCGCCGGCCT TGCGGCGCCT CTACGAACAA
TCGTTGTGTT CACGCTGGCC GGGCCTCGTG CTGCTCGACG CCATCCCCGC CGATCTGGCC
GGGTGGGACC GCTACATTCC GCTGATGTCG CTGCCAATGG CGTTCGCCAC GCGAGTCGCG
ACGATCCCCG CCGCGCTTCC TTATCTGTAT GGCGACGCCG GGCAAGCCGC CGCCTGGCGC
GCGCGGCTCG ACGCGCTGCC GGCGCCGCAT CTGCCGCGCG TCGGCGTGGT GTGGGCGGGC
GGCCATTCGG GCATTGCCGT GGACCGACTA CGCAGTCTCG CTGCCGTGCA AATCGCGCCG
TTGCTGGCGT TGCCTCACGT GCGCTGGATC AGCCTGCAAA AGACCGACGA CCCGGCCAAG
CTTGCCGACG CTGTCACCCG GACGCACCTG ACCGACTGGA CCGACGAAAT CGGCGACTTC
GCGGATACCG CGGCATTGAT CGAGAACCTC GACCTCGTGA TTTCCGTCGA TACCTCGGTC
GCCCATCTTG CCGCCGCGAT GGGCAAGCCG GTGTGGCTCC TCAACCGCTT CGCCGGTTGC
TGGCGCTGGC TGTATGGTCG CGACGACAGC GCGTGGTATC CCGGATTGCG TCTTTTCACC
CAGACGCGGC GTGCCGATTG GCATGATGTG CTGGAGCGGG TCGTCGTTGC TCTTACGCAA
ACTTTCCCCA TGCACGACAA CGCGCACTCT CTCTTGCCGA GCGTGCCTGT CGAGCGACCT
TGA
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| Protein sequence | MLTHPDTYSP TMPTFPSSPA ADHSSLHDEA VQAYQAGRHD AVRTLAERIL AEDPEHVGAI
HLQGLLALAS GHAREALRSL ERAIQIRPEP ILFNTLYAIR LNLGDFAGAV QSIRQGLAIQ
PDFAAFHYNL ALTLQHLGHI EDAALGYRRT LELDPDNSAA HNNLGRVCAD LGAMEEAGRH
YRRAIELSPA NLVARNNLGM ALLATGRYDE AWPYFEDRWV SFKHTDGRPA PAPVEVPLPR
WPGAGVSVGQ GAQAVQSLLV LHEQGLGDSL QFVRYLPLAL AHFARVGYVC PPALRRLYEQ
SLCSRWPGLV LLDAIPADLA GWDRYIPLMS LPMAFATRVA TIPAALPYLY GDAGQAAAWR
ARLDALPAPH LPRVGVVWAG GHSGIAVDRL RSLAAVQIAP LLALPHVRWI SLQKTDDPAK
LADAVTRTHL TDWTDEIGDF ADTAALIENL DLVISVDTSV AHLAAAMGKP VWLLNRFAGC
WRWLYGRDDS AWYPGLRLFT QTRRADWHDV LERVVVALTQ TFPMHDNAHS LLPSVPVERP
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