| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3944 |
|---|
| Symbol | |
|---|
| ID | 4001919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 585227 |
|---|
| End bp | 586225 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637945707 |
|---|
| Product | putative replicase |
|---|
| Protein accession | YP_557107 |
|---|
| Protein GI | 91781901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00660713 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00266774 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATC AAGTATTAGA CACATTCAAT GAGCATCTAC TCAATAAAAC ATATTCAACC
AACTCATTTG AAGAAGGTTT GAAGGTACGA AAAAAGCAAG ATGCTATTAG CTACAACTAT
GTTGGACTCA ATAAACCACT TACAAAGTAC ATTGCCCTTG ATTTGGATAA GGGGGTTGAA
TCCACTTACA TGTTTGAAAA AAAGAATCTA CCTGTTCCTA CGTTAATCGT TATCAATCGA
GAAACGGGAA ACTGTCACTA TCTGTATGGG CTAAAAAAGC CAGTATCTTT TTATAAAAAT
TCTCGATTAC GCCCACAAAG CTACCTCAAA CAAACAACCT TAGCACTAAC GCATGAACTT
GAAGCTGATA TTGCATATGC GCATACAATT GTAAAAAATC CCAATTCTAA ATATTGGAAA
ATACTTGAAA ACGATGTTTA TTACGATTTG GAAGATTTTG AAGAGTATTT AGATATTAAT
AAATTTGACG CAAAACAATC AGTTGTATTT GATGTGGCTG TAGGTGGGCG AAATGTTGCT
TTATTTGATA ATTTAAGGTT TTGGGCGTAT AAAGAAATTA ATATTGTAGA TTACTTAAGC
TATGAAGCTT GGCTTGACAG TGTAAGTGCA AAAGCAACCC AACTAAACAA CTATGAAGCA
CCACTAGACC TAAAGGAAGT AGGGCACACA GCCAAATCAG TTGCTAAATG GGTTTGGAGG
AACCAGGATA GGGTAAAGGG TGGTGTTAAT CGTGGCGTCA TGTCTCACCT AGGTTTAATC
AATGATGGGA TGAGCCTTGA GCAAAAGCAA AGTGCCTCAG CATTGTTCAC CAATGACTCT
AGGAAATCTG GCACGCGAGG AAAAATCACT ACTGCAATAA TTAAATTAAA ATGTAATGGT
GCAAAGATTA CACAAGAATC CATTTCAATA ACTTCTGATG TATCGGTTCG CACCATTAGA
AAATATTGGG ATGAATTTTT GCCAATGATT AATGAATGA
|
|---|
| Protein sequence | MANQVLDTFN EHLLNKTYST NSFEEGLKVR KKQDAISYNY VGLNKPLTKY IALDLDKGVE
STYMFEKKNL PVPTLIVINR ETGNCHYLYG LKKPVSFYKN SRLRPQSYLK QTTLALTHEL
EADIAYAHTI VKNPNSKYWK ILENDVYYDL EDFEEYLDIN KFDAKQSVVF DVAVGGRNVA
LFDNLRFWAY KEINIVDYLS YEAWLDSVSA KATQLNNYEA PLDLKEVGHT AKSVAKWVWR
NQDRVKGGVN RGVMSHLGLI NDGMSLEQKQ SASALFTNDS RKSGTRGKIT TAIIKLKCNG
AKITQESISI TSDVSVRTIR KYWDEFLPMI NE
|
|---|
| |