Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3933 |
Symbol | |
ID | 4001930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 596249 |
End bp | 596920 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637945718 |
Product | DedA family transmembrane protein |
Protein accession | YP_557118 |
Protein GI | 91781912 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.95062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00056893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGACACGT TGCTACATTT CGTCAACCTT GTCTTGCACA TCGACAAGTT CCTCGGAGAC TTTATTCATG TGTACGGCGC GTGGGTCTAC GCGGTGCTGT TCCTGATCGT GTTCTGCGAA ACCGGGCTGG TGGTGCTGCC GTTTCTGCCG GGCGATTCGC TGCTGTTCAT CGGCGGCGCG TTTTGCGCGA CCGGCGAAAT GAATATTGGT TTGCTGATCG TGTTGCTGCT CGTGGCGGCC ATCAGCGGCA ATACCGTCAA TTACATGATC GGGCGAGCCA TCGGACCGCG GGTGTTCAAT TCGCACATTC CTTTTCTCGA ACGCTTTCTC GATCGCAGCG CGCTGCAGAA GACCCACAAC TTCTATGAGA AGCATGGGGG CAAAACCATC GTGCTGGCGC GTTTCATCCC GGTGGTGCGG ACCTTTGCGC CGTTCGTTGC GGGTGCATCC GAAATGACCG TGAGCCGGTT CCAGTTGTTC AACTTTGTCG GCGCGCTGTT CTGGGTGCTG CTGCTGACGT TGCTCGGTTA TTTCTTCGGC AACATTCCGT TTATCCGCCA GTATCTGAAC GTGATCGTGC TGGTGGGTAT CGGCGCAGCG GTGGTGCCGG TCGTGCTCGG CGCGTTGTGG AAGATGATGC GCAAGAACGC CTCGAGCGCG GGCAGCCGCT GA
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Protein sequence | MDTLLHFVNL VLHIDKFLGD FIHVYGAWVY AVLFLIVFCE TGLVVLPFLP GDSLLFIGGA FCATGEMNIG LLIVLLLVAA ISGNTVNYMI GRAIGPRVFN SHIPFLERFL DRSALQKTHN FYEKHGGKTI VLARFIPVVR TFAPFVAGAS EMTVSRFQLF NFVGALFWVL LLTLLGYFFG NIPFIRQYLN VIVLVGIGAA VVPVVLGALW KMMRKNASSA GSR
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