Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3826 |
Symbol | |
ID | 4002521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 720325 |
End bp | 721710 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637945825 |
Product | glutamate decarboxylase |
Protein accession | YP_557224 |
Protein GI | 91782018 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTTTC TCAAATCACC ACCGCCCACG CCCGAGGACG TCGCCGATGA ATACGCCGCC ACGATCTCGG GTTCATCGCT GCCCAAGTAC CGGATTCCGG AGGCGTCGTC CGATCGCCGC GCGGTATTCG ATCTGGTGCG CGACGAACTG TTCATGGACG GCAATTCACG GCAGAACGTC GCGACGTTCT GCACCACGTA TGCCGACGAC GAAGTGCGCC ACCTGATGGA TCTGTCGATC GACAAGAACA TGATCGACAA GGACGAGTAT CCGCAAACGG CGGAGATCGA AATGCGCTGC GTGCACATGC TCGCGGATCT GTGGCATGCC AGCAAGGCAT GGAAGACCAC CGGATGTTCG ACCACGGGTT CGAGCGAGGC TTGCATGCTC GGCGGTCTCG CGCTCAAGTG GCAATGGAAG AAGCGCCGGG AAGCACAGGG CAAGCCGACC GACAAGCCGA ACTTCGTGTG CGGACCGGTG CAGGTGTGCT GGGCCAAATT CGCCCGCTAC TTCGACGTCG AGATGCGCCA GGTGCCCTTG CGCGGCGAGG CAACCGGGCT GACGCCGGAA GATCTGGCCG AGTATTGCGA CGAGAACACG ATCGGCGTGG TGGCCACACT CGGCATTACC TTCACCTGCG TCTATGAACC GGTGAAGGCG CTGGCAGGCG CACTCGACGC GTTGCAAGCC AATGTCGGAC TCGATATTCC GATTCACGTC GACGCTGCCA GCGGCGGCTT CGTCGCGCCG TTCATCCAGC CGGACCTCGA GTGGGACTTC AGCGTGCCGC GCGTGAAATC CATCAACGCG TCGGGCCACA AATACGGACT CGCGCCGCTC GGGGTCGGCT GGGTAGTCTG GCGCAGCACT CAGGATCTGC CCGACGAACT GATTTTCCGG GTCGATTATC TGGGCGGCGA CATGCCCACG TTCGCACTGA ATTTCTCCCG TCCGGCCGGA CAGATCATCG CGCAGTACTA CATGCTGCTG CGCCTGGGCC GCGAAGGCTA CCGGCGGATC CAGCAGGAAT GCGCCGACAC CGCGCAGGCG CTGGCCGACG GGCTGGCGAA GATCGACCAG CTGGAAATGA TCTACGACGG GCGCGGCGCG CTGCCGGCTG TCTGCTACAA GCTGAAGCAT CCGGAAACAG CGGGCTTCAC GCTATTCGAC CTGTCCGATC AGGTCCGCAT GCGCGGCTGG CAGATCGCCT CGTACGAACT GCCGGCAGGG CGGGAAGACA CCATCGTGCA ACGCGTGTTG ATCCGGCGTG GTGTGACGCG CGACATGGCG GCGATGCTGC TTGAAGACAT CAGGCACGCC ATCGGGCATC TGACGAAGAA TCCGGTGCTG CATTCGAGCG CCGGTCCGAC CTTCCACCAC AATTGA
|
Protein sequence | MTFLKSPPPT PEDVADEYAA TISGSSLPKY RIPEASSDRR AVFDLVRDEL FMDGNSRQNV ATFCTTYADD EVRHLMDLSI DKNMIDKDEY PQTAEIEMRC VHMLADLWHA SKAWKTTGCS TTGSSEACML GGLALKWQWK KRREAQGKPT DKPNFVCGPV QVCWAKFARY FDVEMRQVPL RGEATGLTPE DLAEYCDENT IGVVATLGIT FTCVYEPVKA LAGALDALQA NVGLDIPIHV DAASGGFVAP FIQPDLEWDF SVPRVKSINA SGHKYGLAPL GVGWVVWRST QDLPDELIFR VDYLGGDMPT FALNFSRPAG QIIAQYYMLL RLGREGYRRI QQECADTAQA LADGLAKIDQ LEMIYDGRGA LPAVCYKLKH PETAGFTLFD LSDQVRMRGW QIASYELPAG REDTIVQRVL IRRGVTRDMA AMLLEDIRHA IGHLTKNPVL HSSAGPTFHH N
|
| |