Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3533 |
Symbol | |
ID | 4005269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 1028819 |
End bp | 1030048 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637946107 |
Product | OmpC family outer membrane porin |
Protein accession | YP_557506 |
Protein GI | 91782300 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.154111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0896324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC CCACCCTGCT GGCTATCGCC GTTGCCAGCA CGGCCGCTTC GGCCGTACAT GCACAGAGTT CGGTCACGCT GTACGGCCTG ATCGACCAGG GCCTCAACTA TGTGAGCAAC GTGCAGACGG GCCGCGTCGA CGGAGCTCTC GTCGGCAAGC GGCAGATCGC GATGTCCGAC GGGGCGACCG GCATCGGCGG GAGCCGATGG GGGCTGAAGG GCAACGAAGA TCTGGGTAGC GGCCTTCGCG CGATCTTCAC GCTGGAAAAC GGCTTCAACA TCAATACGGG CGGGTTGGCG CAAGGTGGGC TGCTGTTCGG CCGCCAGGCT TTCGTCGGCC TGGCGAACCA GGCCGGGCAG GTCACGCTGG GCCGTCAGTA CAGCATCGTT AGCGACATGC TGGCCCCGCT GTCAGAAGCC GGCGAGATTC CCGGCCACAT GGGCGCAAAT CCTGACGATT TCGACGACCT GGGCCACTCG ATACGCCTGA ACAACACCAT CAAGTTCAAG AGCACGTCGT TCTCGGGCGT GACGTTGGGC GCCCTATACT CGCTGGGTGG AGTGCCTGGC GCGACGGGTC GCAACCAGGT GTGGGCGCTC GCCGCTACCT ACGCGAACGG TCCATTCGCC GCCGGAGCGG GTTATCTAAA TGCACGGGAT CCGAACCTGT CGTACTTCGG CACGAACGGC AACTCCGGCA ATAGCAGTAC GAACAATCTT GGCTCGTTCG GATCTGATAC TACCGCGCAG TCCAACCCCG TCTACGCGGG ATTTGCATCG GCCACGACGC TCCAGTTGAT AGTTGCAGGC ATGAAATACC ACTTCGGCCC AGTGAGCGTA GGCGCGACAT GGTCGCACGC CGGCTTCGGC GGCCTTGGTA ATACCAGCGC GGGCCCCAAC CCGCTACACT ACGCCGGCAC TGCCGCGCTC AACAATGGTG CGCTCAATGT GAGCTACACG TTCACGCCTG CCTTCAACGT CAACGCAGCG TATAGCTACA CGCACAAGGG AAGCGTCGGC GAGTTCGGCA GCGCGAACTA TCATCAAGGC ACGCTCTCGG CGGCGTACTA CCTTTCGAAG CGCACCCAGT TGTACGCGCT TGCAATCTAC CAGAAAGCCA GTGGGACCGA TTCACTTGGC CAATCGGCCG TCGCGTCGAT CACGCAACTC ACGCCGTCGG CCACCGACCA TCAGGCACTC GTGCGCCTCG GCATCCTGCA CACCTTCTGA
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Protein sequence | MKKPTLLAIA VASTAASAVH AQSSVTLYGL IDQGLNYVSN VQTGRVDGAL VGKRQIAMSD GATGIGGSRW GLKGNEDLGS GLRAIFTLEN GFNINTGGLA QGGLLFGRQA FVGLANQAGQ VTLGRQYSIV SDMLAPLSEA GEIPGHMGAN PDDFDDLGHS IRLNNTIKFK STSFSGVTLG ALYSLGGVPG ATGRNQVWAL AATYANGPFA AGAGYLNARD PNLSYFGTNG NSGNSSTNNL GSFGSDTTAQ SNPVYAGFAS ATTLQLIVAG MKYHFGPVSV GATWSHAGFG GLGNTSAGPN PLHYAGTAAL NNGALNVSYT FTPAFNVNAA YSYTHKGSVG EFGSANYHQG TLSAAYYLSK RTQLYALAIY QKASGTDSLG QSAVASITQL TPSATDHQAL VRLGILHTF
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