| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3468 |
|---|
| Symbol | |
|---|
| ID | 4002393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1099891 |
|---|
| End bp | 1101054 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637946170 |
|---|
| Product | putative iron-sulphur Rieske protein |
|---|
| Protein accession | YP_557569 |
|---|
| Protein GI | 91782363 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.39757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC CGGCAAGGAC GATTGCAGTG CAAGCGCTTG TCGACGAGTT GCAAACGGGT
TGCGAGCGGC CCTTCAGCGA CGCGCATGCA ATGCCGCCCG GTGTCTATAC GTCGCCCGAA
TTTCTCACAC TGGAAGAGCG CGCTATCTTC GAGCGCGAAT GGCAATGCGT CGGCCGCGCC
AGTGCGCTCA AAGTACCCGG CGATTACCTG ACGACGCGTA TAGGCACACA ACCCATCGTC
ATCTTGCGCG ACGAACAGAT GCAGCTCAAG GCAATGTCGA ATGTGTGCCT GCATCGCATG
TCGGTACTGC TCGAAGGGCG CGGCAATGTG CGTCGCGTCG TGTGCCCCTA TCACGCATGG
AACTATTCGC TGGACGGTGC GCTGCAAGGC GCGCCGCTGA TGGATCGGCA GGAAGGCTTC
TGCAAGGAGG CCTACAAGCT GCCCGCCGTA CGCTGCGAAG AATGGCAAGG CTGGCTCTAC
GTGACTCTCG ACGAAACCGC GCCGCCCGTT CATCTGCAAC TCGCCAGATT GAGCGAACTG
GTCGGCGCAT ACGGTATGTC GGACTACATT GAAACCTTCC ATGAAGAGCA CGTGTGGGAC
ACGAACTGGA AGATCCTCGC GGAAAACTTC ATGGAGAGCT ATCACCTGCC GATGCTGCAT
CGCGCGACGG TAGGACCGCA TTCGCGGCTC GAGGAAATGG AATGCCCGCC GGGCTATCCC
GCCTTCAACT ATCACTGGAT CACGAAGGAA GCGAGCTTGC CGATCGGCAA TGCGCATCCG
GATAACACGC GTCTCACGGG GCACTGGCGC AAAACTACGG CACTGCTTGC AATCTATCCG
ACGCATCTCG TCACGCTCAC GCCGGGTTAC TTCTGGTATC TCGTGCTGCA GCCTCAAGGT
GTGGGACGCG TGCATATCCG CTTCGGCGGC GGCCTTGCGC CGGAGTTCAT CGCGGATCCC
GAAGCCAACG CGCACATGAC GACGCTAAAG AAGCTGCTCG ACGAAGTTAA CGCGGAAGAC
AAACGCGGCG TGGAAGCAGT CTTTCGCGGC GTGCACGCGC CGCTCGCGCG GCCCGGCCAC
CTGAGCCATC TCGAACGCCC GAACTACGAC TTCGCGCGCT ACCTTGTGAG CAAAATCGCC
GCGACCCAGC TCGGCACGCA TTGA
|
|---|
| Protein sequence | MTNPARTIAV QALVDELQTG CERPFSDAHA MPPGVYTSPE FLTLEERAIF EREWQCVGRA
SALKVPGDYL TTRIGTQPIV ILRDEQMQLK AMSNVCLHRM SVLLEGRGNV RRVVCPYHAW
NYSLDGALQG APLMDRQEGF CKEAYKLPAV RCEEWQGWLY VTLDETAPPV HLQLARLSEL
VGAYGMSDYI ETFHEEHVWD TNWKILAENF MESYHLPMLH RATVGPHSRL EEMECPPGYP
AFNYHWITKE ASLPIGNAHP DNTRLTGHWR KTTALLAIYP THLVTLTPGY FWYLVLQPQG
VGRVHIRFGG GLAPEFIADP EANAHMTTLK KLLDEVNAED KRGVEAVFRG VHAPLARPGH
LSHLERPNYD FARYLVSKIA ATQLGTH
|
|---|
| |