| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3460 |
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| Symbol | |
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| ID | 4001978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1107630 |
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| End bp | 1108781 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637946178 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_557577 |
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| Protein GI | 91782371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.460184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAAGA AGCTTGTCCT GGGCGCTACT GTCGCCGCGA GCCTGATCGC TCCACTCGCG
CATGCCCAGA ATTCAGTCAC ACTCTACGGC CTGATTGACG CCGGACTCAT GTACACGAAT
AACGTCAGGA AAGGGTCTTC CCAAGGCGCT CTCATTCAGG CGACGAGCGG CAACATCAAC
GGAAGCCAGT TCGGCCTGCG CGGTAACGAG GATCTCGGCG GCGGACTCCA TGCGGTCTTC
GTGCTGGAGA ACGGGTTCAA CCTCCAGAAC GGCAAGCTTG GGCAGAACAA CCGCCTGTTC
GGCCGCCAGG CCTACGTTGG TATCGACAGT ACTCAGTACG GGACGCTGAC GCTTGGCCGC
CAGTACGACT CGGGTGTCGA CTTCGTCGCG CCGCTATCCG AGGTGGCTTC GTCGTTCGGC
AAGACGGGCT TCTCGCACCC ATTCGACAAC GATAATCTGG ACTACTCCGT CCGCATCAAC
AACGCTGTCA AGTTCAACAG CCACAGCATT GCAGGTTTGA AGTTCGGAGG ACTTTACGCG
TTCTCCAACA GCACGGACTT CAGCTCGAAT CGCGTATACA GCGTTGGGGC AAGTTACGGG
CAGGGGCCGC TAAACCTCGC GGCCAGCTAC CTGCAGATCA ATGGATCGAA CAGCGCGAAT
ACCTCTGGTG CAATCGACAC GGCCGAATCG ACAGCAAACG GCACGGCCGG ATTCCAGCTC
GGCGCGGACG TGCAACGCGT GGCCGCCGCC GGCGTGAACT ACGCGTTTGG CCCCGCTGTG
CTCGGCTTTG TGTATTCGCA TAGCCAGTAT CAAGGTACGA AGTCATTTGG ATCGGCCGGC
GGCACGGTGC GCTTCGACAA CTTTGAAGTG AACGGCCGTT ATGCACTGAC GCCGGCCCTG
AAGGCCGGTG TCGCTTACGT CTACACGGAC GGCCACGTGA GTCGCACGAC GACCTACGGC
ACGGACCCCA AGTGGAACCA GGTCAATGCG CAACTGATCT ATTCGCTCTC GAAGCGGACC
GATGTCTACG CCGAAGGCAT GTATCAGCAC GTGAGCGGCA AGCAGTACGT TGCGTTTGTG
AACACCTCGG GCGGCGCGTC GTCGAGCGCG AACCAGGTGG TCGGAACCGT CGGCTTGCGA
ACCCGGTTTT AA
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| Protein sequence | MTKKLVLGAT VAASLIAPLA HAQNSVTLYG LIDAGLMYTN NVRKGSSQGA LIQATSGNIN
GSQFGLRGNE DLGGGLHAVF VLENGFNLQN GKLGQNNRLF GRQAYVGIDS TQYGTLTLGR
QYDSGVDFVA PLSEVASSFG KTGFSHPFDN DNLDYSVRIN NAVKFNSHSI AGLKFGGLYA
FSNSTDFSSN RVYSVGASYG QGPLNLAASY LQINGSNSAN TSGAIDTAES TANGTAGFQL
GADVQRVAAA GVNYAFGPAV LGFVYSHSQY QGTKSFGSAG GTVRFDNFEV NGRYALTPAL
KAGVAYVYTD GHVSRTTTYG TDPKWNQVNA QLIYSLSKRT DVYAEGMYQH VSGKQYVAFV
NTSGGASSSA NQVVGTVGLR TRF
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