Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3273 |
Symbol | |
ID | 4002109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1323416 |
End bp | 1325269 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637946364 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_557761 |
Protein GI | 91782555 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.773133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGAAA GCCGTTATCA TACGCACGGC TGCCCAAAAC ATTGGACTGG AGTTGCGCCG CTTTACTCGG GACTTTACTG TTTGCGCGCG TCAAAAACAC GTTCGATCGC TTCGACTACT CACGAATATC AAAAGGCTGG CGCGATGCAA GACCACCTCT ACGCCGCAGC GCGTCCGCGC GACGCCGCGC TAGCGTCGGC GCCTTGCGGC ATGTTCATCT GCCGCGCGGA TGGCACGTTC GATTCCGTCA ACGCCGCTTT CGAAAAGCTG ACTGGATTTG CGGCAGAGGA ACTGATCGGG CGGCGCACTT TCGAATCTTT GCTCGATCCG GCCGAATTAG CGAGGCGCCG CGCCGAGCTT CCGCAGCTTG AAATGGTGAC TTCGCGCTAC GAAAGCGAAT GGAGTTTCCT CAGGCGCAAT GGCACGCCGA TTCGCGTGGT GCTGGCGTTG GCGCCGCTTG TCGCGGGGCC GGCGCATGCG GGCGGTGCAG GCGCCGGACC GGCGTGTTAT GTGGGCATGG CATTCGACAT GACACGTTAC GCGCAGTCGG AAGCGCGTCT CTGGTATGTC GCGCATCACG ACGGCGTGAC CCGTCTGCCG AATCAAACGC TTTTTACTGA ACGGCTGGAG TTGACGATCG CGCGTTGCCA GCGCAACGGC AGCGGTTTTA CCGTGCTGAT CGCCGAACTC GATCACTTGC GCAAACTGCG CGACGCGCTC GGTTTGCACG CCGCCGAGCT CGTGCTGCAG ATCGTCGGTG AACGCTTGCG CGGCCTCTTT CCAAACGACG GCACGATCGC CTCGATCGGC GGGACGCAGT TCGCGCTGCT GGTCAACGAA ACCGGCGCAG CCGCCGATGC CTTCGCGGCC GAAGCGCTGG CCCGCATCGC CGAAGCCATC GACTACGCCG GCACCGCGTT GAACATTACC GCGAGCATCG GCATCGTCGC TTATCCGGCC GATGGTGGCG ATGCGCCTAC GCTGATGCGT CGCGCGGGCG TGGCGTTGTC GGCGGCATCG GCCGTGACGG GCAATGCGGT GCGGCGCTTT TCCGCCGCGC TGGAAGGTCA GGCCGCGCGC CGCTTCGAGC TGGAGACCAT GCTGCGTGAA GCGATCGAGC GTCAGCAACT GCATCTCGTG TATCAACCGC AGGTGACGCT CTCCACTGGC CGTATCGCGC AAGTCGAAAC GCTGCTGCGC TGGAACCATC CGCAGCGCGG GCTGATCAGC CCGGTCGAAT TCGTGCCGGT CGCGGAGGAG GCGGGTCTGA TCGAGCAGAT CGGCGAGTGG GTGATCCGGA CCGCGTGCCG CGACGCCGGC AAATTGCTGC GACTGACCGG CACGTTGCCG CGCTTCGCGG TGAATGTATC GCCGCAGCAG TTCCAGCGGC AAAACCTGTT CGAGACGATT CGCGAAGCAC TCGATGAGGC CGCGCTCGAC CCTTCCTACC TCGAAGTGGA AATCACCGAA GGAGTGCTGC TCGGCGACAC CGAGCAAGCT TTGCAAACGC TCTTTGCGTT GCGCGAACTG GGCGTGGAAG TCGCGGTGGA CGATTTCGGC ACCGGCTATT CGAGCCTCGC GTATCTGACG CGTTTCCCGC TGAATCGCCT GAAAATCGAC CGCTCGTTCG TGATGCGCAT GAGCACGGAT TCGCAGTGTG AGGCGCTGGT CGGCGCCATC ATCGCGATGG CGCATGCGCT CAAATCGCGC GTAACGGCCG AAGGCGTCGA AACGGCGGAG CAGGCCGCGC AACTCGAAGC GCTCGGCTGT GACGAAGCGC AAGGCTTCTG GTTCTCGCGT CCGATTACGG TTGGCGCGCT GCGGAATTTG TTGAGGCCGT TGGGCACACC CTAA
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Protein sequence | MRESRYHTHG CPKHWTGVAP LYSGLYCLRA SKTRSIASTT HEYQKAGAMQ DHLYAAARPR DAALASAPCG MFICRADGTF DSVNAAFEKL TGFAAEELIG RRTFESLLDP AELARRRAEL PQLEMVTSRY ESEWSFLRRN GTPIRVVLAL APLVAGPAHA GGAGAGPACY VGMAFDMTRY AQSEARLWYV AHHDGVTRLP NQTLFTERLE LTIARCQRNG SGFTVLIAEL DHLRKLRDAL GLHAAELVLQ IVGERLRGLF PNDGTIASIG GTQFALLVNE TGAAADAFAA EALARIAEAI DYAGTALNIT ASIGIVAYPA DGGDAPTLMR RAGVALSAAS AVTGNAVRRF SAALEGQAAR RFELETMLRE AIERQQLHLV YQPQVTLSTG RIAQVETLLR WNHPQRGLIS PVEFVPVAEE AGLIEQIGEW VIRTACRDAG KLLRLTGTLP RFAVNVSPQQ FQRQNLFETI REALDEAALD PSYLEVEITE GVLLGDTEQA LQTLFALREL GVEVAVDDFG TGYSSLAYLT RFPLNRLKID RSFVMRMSTD SQCEALVGAI IAMAHALKSR VTAEGVETAE QAAQLEALGC DEAQGFWFSR PITVGALRNL LRPLGTP
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