| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3012 |
|---|
| Symbol | |
|---|
| ID | 4002033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1582378 |
|---|
| End bp | 1583121 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637946629 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_558019 |
|---|
| Protein GI | 91782813 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT CAATCAGCCA GCAAGTCGCT ATCGTCACCG GCGCATCCCG CGGCATTGGC
GCAGCGGTCG CGCAACGCCT CGCCAACGAC GGCTTCGCCG TCGCGATCAA CTACGCATCC
AGTTCGACCG AAGCCGATGC GCTCGTCGCG AAACTCACGG CGGCCGGCGC CAAAGCCGTC
GCGGTGAAGG CCGACGTGTC GAACGCCGGC GACGTGCGCC GCCTGTTCGA GATCACCGAA
CAGCAGCTCG GCAAAGTGGA CGTGCTCGTC AACAACGCCG GCGTGCTCAA GACCACGCCG
CTCGCCGACA CCAGCGACGC GCTGTACGAC CAGACCTTCG ACATCAACGT ACGCGGCACC
TTCAACACCT TGCGCGAAGC AGCCGCGCGC ATGAACGACG GCGGACGCAT CGTCAACTTT
TCGAGCACCA CGCTGGCGCT GAACATGCCG GGCTACGCGA TCTACAACGC GACCAAGGCT
GCCGTCGAAG CCTTTACGCA TGTATTCGCC AAGGAACTGC GCGGCCGCAA CATCACCGTC
AACGCCGTGG CGCCGGGTCC GATCGCGACG TCGCTGTTCC TCGACGGCAA GACTGAAGAA
CAGATCCAGA CCTTCGCCAA GATGCCGCCG CTGCAACGTC TCGGCCAGCC GGACGATATC
GCATCCGTGG TGGCGTTCCT CGCCGGTCCG GACGCGGGCT GGGTCAACGG TCAGATTCTG
CGTGCCAACG GCGGCCTCGC CTGA
|
|---|
| Protein sequence | MNASISQQVA IVTGASRGIG AAVAQRLAND GFAVAINYAS SSTEADALVA KLTAAGAKAV
AVKADVSNAG DVRRLFEITE QQLGKVDVLV NNAGVLKTTP LADTSDALYD QTFDINVRGT
FNTLREAAAR MNDGGRIVNF SSTTLALNMP GYAIYNATKA AVEAFTHVFA KELRGRNITV
NAVAPGPIAT SLFLDGKTEE QIQTFAKMPP LQRLGQPDDI ASVVAFLAGP DAGWVNGQIL
RANGGLA
|
|---|
| |