| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2993 |
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| Symbol | |
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| ID | 4004683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1609410 |
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| End bp | 1611287 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637946648 |
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| Product | ABC peptide transporter, periplasmic ligand binding protein |
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| Protein accession | YP_558038 |
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| Protein GI | 91782832 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.17711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTG TGAAGTTTCG CTGGCCACGC GCCGCGCGAA TCGCGCTGTG CACCGGTGCG
TGTCTGGCAT TGAGCACGGT CTGCGCGCAG GCCCGGCCCT CGATTGCGCA ATACGACGAG
CCTAAATATC CCGCCGATTT CACGCATTTC GATTACGCGA ATCCCGACGC ACCGGCCAAT
GGCACGCTCA GTTTCGAGAA CTACAACGAA CTGCAGACTT ACGATTCGCT GAATCCGTTT
CTGGTGCGCG GCGCGCCCGC ACCGGACATT CTGAATCTGA TGTTCGACAC GCTGATGCAG
CGGAGTTGGG ACGAACTCGC GTCCGAGTAC CCATTGATTG CGAACGACGT CGAGGTTGCG
CCCGACCTGA GCTCGGCGAC GTTCCATATC AATCCTGCCG CACGCTTTTC TAACGGCGAT
CCGATCACCG CTGCCGACGT CAAATACTCG TTCGACACAT TGACGGGTCC GAAAGCGTCG
CCGCTCTTCA ATGCGCAGTT TTCGGTCATC AAGAATGCGA TCGTGATCGA CAGAAGCACA
ATCCGTTTCG ACTTCAAACA CGCGGAGCGA GACGCCCCGT TGATTGCCGG CGATTTACCA
ATCTTCTCGC CGAAGTGGGG CATGCAGCCC GACGGTAAAC GTCCGCCATT CGACCAGATC
GCGGTCGCCC CGCCGATCAG CAGCGGCGCG TATCTGATCG AAGCCCGCAA GAACGACAAG
GAGATCGTGT ATCGCCGCAA TCCGGACTAT TGGGCTGCCA ATTTGCCCTC GCGGCGCGGC
ATGTTCCGTT TCGAGCGCAT CACCTTCAAG CTGTATCGCG ACCACTACAC GCAACTCGAA
GCATTCAAGG CGGGTGATGC CGACGCCGTC GTCGAATACA GCGCAACGCA GTGGGCACGC
AAATACGTCG GCAAGAACTT TGACAATGGA CTGTTGAAGA AGGGCGAATT CGCCGATGGT
CCCGCGCAGA TGCAAGGCAT GCTCATGAAC CTGCGCAAGC CGATGTTCCA GGATCCGCGC
GTGCGGCACG CGCTGACGAT GGCCTTCGAC TACGACTGGA TGAACCGCAT GATGTTCTAC
GGTCAATACC GTCGCACGAG CAGCTATTTC GAAGCGAGTC CGTTCGGCGC GACCGGCATG
CCCGGCCCGA AGGAACTGGC TTTGCTTGAA CCGTTGAGGG CGAGCGTACC GCCGGAAGTG
TTCGGTCCCA TGCTGAAGCA GCCCGACACC ATCGCGCCAA ACTCCTTGCG CGGCAATCTG
CGAGTCGCGC GCGATCTGCT GGCGCAGGCC GGCTGGCACT ATCGCGACGG CGCACTGCGC
GACGCCAGCG GCACGCCCAT GACGATCGAA ATCATGGACG ACCAGCCCGG CATGGACCGC
CTGATCCTGC CTTATATGCA GGCGCTCGGC ATGCTCGGCA TTCAGGCGCA TATGCGCGAG
ATCGACAGCG CGTTGTACCA GAAGCGGCTG GATAACTTCG AGTACGACAT GACCACCTTC
ATCTATCCGC CGGTGACGAT TCCGGGTGCC GAACTGACGC GCCGTTTCGG CAGCGCTGCC
GCGTCGGAAA TCGGTTCGGA AAACTATCCG GGCATCCGCT CCAAAGCGGT CGACTCACTC
ATTCATTCGG CCCTTTCCGC CGACAACCTC GACGATCTGG AAGCAGCCAC GCGCGCACTG
GATCGCGTGC TGATCTATTC GTTCTACCTC GTGCCGGAGT ACTACGCGCC TGGCGCGCGA
ATCGGCTACA AGGCGACGCT GGGTCATCCG GACAAGGTGC CCATGTCGTA TCAATACGAA
GACTGGGTGA TCGATTACTG GTACAACAAG GCGCCTGCCG CCCAGGGCGC ATCTTCCACC
ACGGCTACGG CCCACTGA
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| Protein sequence | MRLVKFRWPR AARIALCTGA CLALSTVCAQ ARPSIAQYDE PKYPADFTHF DYANPDAPAN
GTLSFENYNE LQTYDSLNPF LVRGAPAPDI LNLMFDTLMQ RSWDELASEY PLIANDVEVA
PDLSSATFHI NPAARFSNGD PITAADVKYS FDTLTGPKAS PLFNAQFSVI KNAIVIDRST
IRFDFKHAER DAPLIAGDLP IFSPKWGMQP DGKRPPFDQI AVAPPISSGA YLIEARKNDK
EIVYRRNPDY WAANLPSRRG MFRFERITFK LYRDHYTQLE AFKAGDADAV VEYSATQWAR
KYVGKNFDNG LLKKGEFADG PAQMQGMLMN LRKPMFQDPR VRHALTMAFD YDWMNRMMFY
GQYRRTSSYF EASPFGATGM PGPKELALLE PLRASVPPEV FGPMLKQPDT IAPNSLRGNL
RVARDLLAQA GWHYRDGALR DASGTPMTIE IMDDQPGMDR LILPYMQALG MLGIQAHMRE
IDSALYQKRL DNFEYDMTTF IYPPVTIPGA ELTRRFGSAA ASEIGSENYP GIRSKAVDSL
IHSALSADNL DDLEAATRAL DRVLIYSFYL VPEYYAPGAR IGYKATLGHP DKVPMSYQYE
DWVIDYWYNK APAAQGASST TATAH
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