Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2909 |
Symbol | |
ID | 4003900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 1711223 |
End bp | 1714534 |
Gene Length | 3312 bp |
Protein Length | 1103 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637946729 |
Product | multidrug efflux system protein |
Protein accession | YP_558119 |
Protein GI | 91782913 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT CGCGTCCGTT TATCTCCCGT CCGGTCGCCA CCACGCTGCT CGCGGTCGGC ATTGCGCTGG CCGGCATTTT CGCGTTCACG AAGCTGCCGG TGGCGCCGCT GCCGCAGGTC GATTTCCCGA CCATTTCAGT GCAGGCCACG TTGCCGGGCG CGAGTCCGGA CACCGTGGCG ACCAGCGTCG CCAGTCCGCT CGAACGGCAT CTCGGCTCGA TCGCCGACGT CACCGAAATG ACCTCGATGA GCTCGGTCGG CTCGACGCGC ATCACCATGC AGTTCGGCCT GAACCGCGAC ATCGACGGCG CCGCGCGCGA CGTGCAGGCC GCCATCAACG CGGCGCGCGC CGATCTGCCG GCGAGCCTGC GCAGCAACCC GACGTACCAC AAGGTCAATC CGGCCGACGC GCCGATCCTG ATCCTCGCGC TCACGTCGAA AACGCTCACC GCCGGCCAGT TGTACGACTC CGCGGCCACC GTGCTGCAAC AGTCGCTCTC GCAGGTGGAC GGCGTCGGCG AAGTGGACGT GAGCGGCTCG GCCAATCCCG CCGTGCGCGT CGAACTGGAA CCGAACGCGC TCTCGCACTA CGGTATTGGC CTCGAAGACG TGCGCGCGGC GCTCGCCGCC GCCAACGCGA ACAGCCCGAA AGGCTCGATC GAATTCGGCC CGAACCGCGT GCAGATCTAC ACCAACGACC AGGCCAGCAA GGCGTCGCAA TACAAGGACC TGGTCATCGC CTATCGCAAC GGCGCGGCGG TGAAGCTCTC GGACGTGGCG GAGGTGGTCG ATTCGGTCGA AGATCTGCGC AACCTCGGGC TCTTCAACGG CAAGCGTTCG GTGCTGGTGA TCCTGTATCG CCAGCCGGGC GCGAACATCA TCGACACCAT CGACCGGGTG ACGGCAATGC TGCCGCAACT GCACGCGTCG CTGCCCGCGG ACGTCGAGAT CGCGCCGGCC GCCGACCGCT CCACCACGAT CCGCGCGTCG CTGAAAGACA CCGAGCGCAC CCTCGTGATC GCGGTGGCGC TGGTGGTGAT GGTGGTGTTC CTGTTCCTGC GCAACTGGCG CGCCACGCTG ATTCCGAGCG TGGCCGTGCC GATCTCGATC ATCGGCACGT TCGGCGCGAT GTACATGCTC GGCTTCTCGA TCGACAACCT CTCGCTGATG GCCTTGACCA TCGCGACCGG CTTCGTGGTG GACGACGCGA TCGTGGTGCT GGAGAACATC TCACGGCATA TCGAGAACGG CGTGCCGCGC ATGAAGGCGG CCTTTCTCGG CGCGCGCGAA GTCGGCTTTA CGGTGCTGTC GATCAGTATT TCGCTGGTCG CCGTGTTCCT GCCGATCCTG CTGATGGGCG GCATTGTCGG GCGCCTGTTC CGCGAATTCG CGCTGACGCT TTCGCTCGCG ATCGGCGTGT CGCTGATCGT CTCCCTCACG CTCACGCCGA TGATGTGCTC GCGCCTCCTG CGCGAGCCGC ACGAGCAGAA GGAAGAAGGC CGGTTCGGCC GCTGGCTGGA ACGCGGCTTC GCGTCGATGC AGCGCGGCTA TGAACGCACG CTCGGCTGGG CGCTGCTGCA TCCGCGCCTG ATCGTGACGA TCCTGCTGCT GACCATCGGC CTGAACGTCT GGCTGTACAT CATCGTGCCG AAGGGTTTCT TTCCGCAGCA GGACACCGGG CGGCTGATCG GCGGCATTCA GGCCGATCAG AGCACCTCGT TCCAGGCCAT GAAAGGCAAG TTCGCGCAGA TGATGGAGAT TGTCGGCAAG AATCCGGCGG TGGATAGCGT GGCCGGCTTC ACGGGCGGGC GGCAGACCAA CTCCGGCTTC ATGTTCGTGA CGCTGAAACC GAAATCCGAG CGCAAGCTTT CCGCCGATCA GGTGATCCAG CAACTGCGCG CGCCGCTCGG CGACGTGGCC GGCGCGCGGA CCTTCCTGCA GGCGGTGCAG GATATTCGGG TCGGCGGACG GCAATCGAAC GCGCAGTACC AGTTCACGCT GCTCGCCGAT TCCACGCCCG ACCTGTACCT GTGGGGGCCG AAGCTCACCG AGGCGCTGCA GGCGCGCCCC GAACTCGCCG ACGTGAACTC CGACCAGCAG CAAGGCGGCC TCGAAGCGAT GGTGACGATC GACCGCGCCA CCGCCGCGCG CCTCGGCATC AAGCCGGCGC AGATCGACAA CACCTTGTAC GACGCGTTCG GCCAGCGCCA GGTATCGACG ATCTACAACC CGCTGAACCA GTATCACGTC GTGATGGAAG TCGCGCCGAA GTACTGGCAG AGCCCGGATA TGCTCAAGCA GATCTATATC AGCACCTCGG GCGGCAGCGC GAGCGGCGCG CAGACCACCA ATGCACCGGC GGGCACGGTG ACGGCGGCGG CGAACACCAC CTCGACCAGC GCGACGACGG GCGGCACGGC GGGCACGACC GCATCGAGTG CGGCGAGCAT CGCCGCCGAC TCCGCGCGCA ACCAGGCGAT CAACTCGATC GCGGCGAGCG GCAAGTCAAG CGCTTCGTCG GGCGCGGCGG TGTCGACCGC GAAGGAAACG ATGGTGCCGC TGTCGGCGAT CGCGAGCTTC GGGCCGGGCA GCACGCCGCT CTCCGTGAAC CACCAGAGCC AGTTCGTGGC CTCGACGATT TCGTTCAACC TGCCGCCGGG CGTGTCGCTT TCCACCGCAA CCCAGGCAAT CTACGACACG ATGGCGCAGA TCGGCATGCC GGGCACCATC CACGGCAGCT TCCAGGGCAC GGCGCAGGCG TTCCAGCAGT CCATGTCCGA TCAGCCGATC CTGATTCTGG CCGCGCTGGC CGCCGTGTAT ATCGTGCTCG GCATGCTGTA CGAGAGCTAC ATCCATCCGC TGACGATTCT GTCCACGCTG CCTTCAGCGG GCGTGGGAGC GCTGCTGGCG CTGCTGCTCT TCAAGACTGA GTTCAGCATC ATCGCGCTGA TCGGCGTGAT TCTGCTGATC GGCATCGTGA AGAAGAACGC GATCATGATG GTGGACTTCG CGATCGAAGC CTCGCGGCAC GGACTGTCTT CGCGCGACGC GATTTTTCAG GCGTGTCTGC TGCGTTTCCG GCCGATCATG ATGACCACCT GTGCCGCGCT GCTCGGCGCG TTGCCGCTCG CGTTCGGGCG CGGCGAAGGC GCCGAGCTTC GCGCGCCGCT CGGGATCGCG ATTGTCGGCG GCCTGATCGT CAGCCAGATG CTCACGCTCT ATACGACGCC GGTGGTATAT CTCTACATGG ACCGGATCCG CGTGAGGTGG GAATCGCGCA GGACACGGCG CACGGGGATT GCTCCTTCCT GA
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Protein sequence | MNLSRPFISR PVATTLLAVG IALAGIFAFT KLPVAPLPQV DFPTISVQAT LPGASPDTVA TSVASPLERH LGSIADVTEM TSMSSVGSTR ITMQFGLNRD IDGAARDVQA AINAARADLP ASLRSNPTYH KVNPADAPIL ILALTSKTLT AGQLYDSAAT VLQQSLSQVD GVGEVDVSGS ANPAVRVELE PNALSHYGIG LEDVRAALAA ANANSPKGSI EFGPNRVQIY TNDQASKASQ YKDLVIAYRN GAAVKLSDVA EVVDSVEDLR NLGLFNGKRS VLVILYRQPG ANIIDTIDRV TAMLPQLHAS LPADVEIAPA ADRSTTIRAS LKDTERTLVI AVALVVMVVF LFLRNWRATL IPSVAVPISI IGTFGAMYML GFSIDNLSLM ALTIATGFVV DDAIVVLENI SRHIENGVPR MKAAFLGARE VGFTVLSISI SLVAVFLPIL LMGGIVGRLF REFALTLSLA IGVSLIVSLT LTPMMCSRLL REPHEQKEEG RFGRWLERGF ASMQRGYERT LGWALLHPRL IVTILLLTIG LNVWLYIIVP KGFFPQQDTG RLIGGIQADQ STSFQAMKGK FAQMMEIVGK NPAVDSVAGF TGGRQTNSGF MFVTLKPKSE RKLSADQVIQ QLRAPLGDVA GARTFLQAVQ DIRVGGRQSN AQYQFTLLAD STPDLYLWGP KLTEALQARP ELADVNSDQQ QGGLEAMVTI DRATAARLGI KPAQIDNTLY DAFGQRQVST IYNPLNQYHV VMEVAPKYWQ SPDMLKQIYI STSGGSASGA QTTNAPAGTV TAAANTTSTS ATTGGTAGTT ASSAASIAAD SARNQAINSI AASGKSSASS GAAVSTAKET MVPLSAIASF GPGSTPLSVN HQSQFVASTI SFNLPPGVSL STATQAIYDT MAQIGMPGTI HGSFQGTAQA FQQSMSDQPI LILAALAAVY IVLGMLYESY IHPLTILSTL PSAGVGALLA LLLFKTEFSI IALIGVILLI GIVKKNAIMM VDFAIEASRH GLSSRDAIFQ ACLLRFRPIM MTTCAALLGA LPLAFGRGEG AELRAPLGIA IVGGLIVSQM LTLYTTPVVY LYMDRIRVRW ESRRTRRTGI APS
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