| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2514 |
|---|
| Symbol | |
|---|
| ID | 4004897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2156031 |
|---|
| End bp | 2157623 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637947124 |
|---|
| Product | mannose-1-phosphate guanylyltransferase (GDP) |
|---|
| Protein accession | YP_558511 |
|---|
| Protein GI | 91783305 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0272748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCA TCGTAGAACC AGGCAATCCG CTCGCGGCGA CCGCGAGCGT TACCGGAACG
GCCACGCGTT TGTCCGTGCA GCCGGTGATA CTCGCAGGCG GCTCGGGGAC GCGATTGTGG
CCGCTGTCGC GCGAACGCAA TCCGAAGCAA CTGATCGGCC TGATGGGCGA CGAGTCGCTG
CTCGAAAGGA CCCTGCGCCG GCTCGACGCG TCGTTCGCCG CGGTGGAGCA CGAAACGCCG
GCAGCCGGCA CGCGCCTTAT CGCGGCGCCG CTGGTGGTCT GCTGCGAGGA CTTGCGGCTG
CAAACGCTCG AACGTCTGCA ACGCCTGGAG AGGCCGGGCC GGCCGGTGCG CATGGTGCTC
GAACCGGTGC CGCGCAACAC CGCGCCCGCG CTGACGGTGG CGGCGCTGGC GGCGCGCGCG
GCGGCTGTCG AGGGCGACGA TCCGGTCATC GTGGCGCTGC CGGCGGATCA CCTGATCGGC
GATCACGTTG CGTTCGGCAA GGCGCTCGCC GAGGCGCTCG AACACGCGGC GGCGGGCGCG
ATCGTCACGC TCGGCGTGCC GCCGAAGCGC GCGGAGACCG GCTACGGCTA TATCCGCACG
GGTACGGCGC TCGGCACGCG GGGCGCGCGC GTCATCGAGC GGTTCGTCGA GAAGCCCGAT
CCGGAACTCG CGGAGCGCTA CGTCGCGTCC GGGGATTACT GGTGGAATAG CGGCATGTTC
GTGGTGCGCG CTTCCGTGTG GCTCGCGGCG ATCGAGTTGT GCCAGCCGGC GATCGCCGCA
GCCTGCGCGG ACGCGTTCGA GCAGGCCACG GTGGACGGCG ACGGCGCCCT GCATCTCGCG
CGCAAGGCGT TCGCCCTGTG CCCGTCCGAT TCGATCGACT ACGCGGTGAT GGAGCGTGTG
GCCACCGACG CGCGGCTGGT CGGCGTGGCC GTCCCGCTCG TCGCGGGTTG GTCGGACGTG
GGTGCGTGGG ATTCGGTGTG GGAAGCGTCC GCGAAAGACG CCGACGGCAA TGTCGCGCGC
GGCCGCGTGA TGTTCGCCGG CTCGACCGAC AGCTTCGCGC ATTCGGAGGG CCGGCTCGTC
GCCTGTGTCG GCGTGAGCGG CGTGATGGTG GTCGAAACCG CCGACGCAGT GCTGGTCGTC
GCGAAAGACC GCGTGCAGGA CGTCAAGGCG GTGGTCAGCC GTCTCAAGCT GGAGCACGGC
GCGGAAGCAC AGGAGCATCG CAAGGTCGGC CGGCCGTGGG GTTATTACGA CTCGCTCGAA
CGCGGCGCGC GCTTTCAGGT GAAGCGCATC GTCGTCAAGC CGGGCGGCCG TCTTTCGCTG
CAGATGCATC ATCACCGCGC CGAACACTGG ATCGTGGTGC GCGGCACGGC GCGCGTCACG
CGCGGCGAGG AATGCTTCTT TCTCACGGAG AATCAGTCCA CTTACATTCC GCTGGGCGTT
ACGCACCGGC TGGAGAATCC GGGCAAGACT TCGCTCGAAA TGATCGAGGT GCAATCGGGC
GGCTACCTCG GCGAAGACGA CATCGTGCGT TTCGACGACC AGTACGGTCG CGATCAGGAG
AGCGGCCATG CAGGCAAGGG TACGTCACGC TGA
|
|---|
| Protein sequence | MNRIVEPGNP LAATASVTGT ATRLSVQPVI LAGGSGTRLW PLSRERNPKQ LIGLMGDESL
LERTLRRLDA SFAAVEHETP AAGTRLIAAP LVVCCEDLRL QTLERLQRLE RPGRPVRMVL
EPVPRNTAPA LTVAALAARA AAVEGDDPVI VALPADHLIG DHVAFGKALA EALEHAAAGA
IVTLGVPPKR AETGYGYIRT GTALGTRGAR VIERFVEKPD PELAERYVAS GDYWWNSGMF
VVRASVWLAA IELCQPAIAA ACADAFEQAT VDGDGALHLA RKAFALCPSD SIDYAVMERV
ATDARLVGVA VPLVAGWSDV GAWDSVWEAS AKDADGNVAR GRVMFAGSTD SFAHSEGRLV
ACVGVSGVMV VETADAVLVV AKDRVQDVKA VVSRLKLEHG AEAQEHRKVG RPWGYYDSLE
RGARFQVKRI VVKPGGRLSL QMHHHRAEHW IVVRGTARVT RGEECFFLTE NQSTYIPLGV
THRLENPGKT SLEMIEVQSG GYLGEDDIVR FDDQYGRDQE SGHAGKGTSR
|
|---|
| |