| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2476 |
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| Symbol | |
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| ID | 4004033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2188174 |
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| End bp | 2189001 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637947164 |
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| Product | ligolipopolysacharide ABC exporter inner membrane subunit NodJ family protein |
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| Protein accession | YP_558549 |
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| Protein GI | 91783343 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.631988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.99645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC GCACATACGA AACCCCGGGC GACACGCCAT CGAGACAGGA CACCTTCGCC
GCCTTTCCCG CGAACGCGAC CAACTGGATC GCCGTGTGGC GCCGCAACTA TCTGGTGTGG
AGAAAACTTG CGATCGCCTC GATGTTCGGC AATCTCGCCG ATCCGATGAT CTATCTGTTC
GGCCTCGGCT TCGGGTTGGG GCTGATGGTC GGCCATGTGG ACGGCGTGTC GTACATCGCC
TTTCTCGCGG CCGGCACGGT GGCGTCGAGC GTGATGATGT CCGCGAGCTT CGAGTCGATG
TATTCGGGCT TCTCGCGCAT GCACGTGCAG CGCACCTGGG AAGCGATCAT GCACACGCCG
CTCACGCTGG GCGACATCGT GCTCGGTGAA GTGATCTGGG CGGCCAGCAA GTCGATACTC
TCTGGCGCCG CGATCATGCT GGTGGCCGGC GCGCTGGGCT ACGCGAATTT TCCGTCGATG
CTGCTGGCGT TGCCGGTCAT CGTGCTGACC GGGCTCGCGT TCGCGAGCAT CGCAATGGTG
GTCACGGCGC TCGCGCCTTC GTACGACTTC TTCATGTTCT ATCAGACACT GGTGTTGACG
CCGATGCTGT TACTGTCCGG CGTGTTCTTT CCGGTGTCGC AACTGCCCGC CATTGCGCGG
GGTGTCACCG AAGTGCTGCC GCTGGCGCAC TCCGTCGACC TGATGCGGCC GGCCATGCTC
GGGCGGCCGG TCGAGCACGC GCTGGTGCAT GTGGCCGTGC TGGCGGCGTA TGCGCTGGGC
GGCTTTATCG TGTCGGCGAT TCTGTTCAGA CGCAGGATGA TGAAGTAG
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| Protein sequence | MDARTYETPG DTPSRQDTFA AFPANATNWI AVWRRNYLVW RKLAIASMFG NLADPMIYLF
GLGFGLGLMV GHVDGVSYIA FLAAGTVASS VMMSASFESM YSGFSRMHVQ RTWEAIMHTP
LTLGDIVLGE VIWAASKSIL SGAAIMLVAG ALGYANFPSM LLALPVIVLT GLAFASIAMV
VTALAPSYDF FMFYQTLVLT PMLLLSGVFF PVSQLPAIAR GVTEVLPLAH SVDLMRPAML
GRPVEHALVH VAVLAAYALG GFIVSAILFR RRMMK
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