Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2475 |
Symbol | |
ID | 4004034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2189089 |
End bp | 2190003 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637947165 |
Product | nodulation ABC transporter NodI |
Protein accession | YP_558550 |
Protein GI | 91783344 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.907427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAG CCGCCATCGA ATTTGACAAG GTTAAAAAAA GCTACGGCGA AAAAACGGTC GTCGACGGGC TGTCGTTCCA TGTCGCCCCC GGCGAATGCT TCGGCCTGCT GGGCCCGAAC GGCGCGGGCA AGACTACCAC GTTGCGCATG CTGCTCGGCA TCGCCGCGCC GGATGCGGGC ACGATCCGCC TGTGCGGCGA ACCGATCCCC AGACGCGCGC GCGTGGCGCG GGCACGCGTC GGCGTGGTGC CGCAGTTCGA CAATCTCGAC CCCGACTTCA CGGTGCGCGA GAACCTGCTG GTGTTTGGCC GCTACTTCGG CATGAGCGCC GCGCAATGCA GGGCAATGGT GCCGCCGCTG CTCGAATTCG CGCGCCTCGA AAGCAAGGCC GACGCGCGCG TGAGCGAACT CTCCGGCGGC ATGAAACGGC GCCTCACGCT GGCGCGCGCG CTCGTCAACG ACCCCGACGT GCTGATTATG GACGAACCGA CCACCGGTCT CGATCCGCAG GCGCGGCATC TGATCTGGGA GCGGCTGCGT TCGTTGCTCG CGCGCGGCAA GACCATTCTG CTGACCACGC ACTTCATGGA AGAAGCCGAA CGGCTCTGCC ACCGGCTATG CGTGATCGAG GAAGGACGCA AGATCGCCGA AGGCGCGCCG AGCGCATTGA TCGCCTCCGA GATCGGCTGC GACGTGATCG AGATTTTCGG ACCCGATCCG GTTGCCCTGC GCGATGAACT GGCGCCGCTC GTCGAGCGCA CCGAGATCAG CGGCGAGACG CTGTTCTGCT ACGTCATCGA CGCGCAGCCG GTGCATGCGC GCCTGAAACA GCGCGCGGAC CTGCGCTATC TGCACCGCCC GGCGAATCTG GAAGATGTGT TCCTGCGGCT CACCGGCCGC GAGATGCAGG ACTAG
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Protein sequence | MPEAAIEFDK VKKSYGEKTV VDGLSFHVAP GECFGLLGPN GAGKTTTLRM LLGIAAPDAG TIRLCGEPIP RRARVARARV GVVPQFDNLD PDFTVRENLL VFGRYFGMSA AQCRAMVPPL LEFARLESKA DARVSELSGG MKRRLTLARA LVNDPDVLIM DEPTTGLDPQ ARHLIWERLR SLLARGKTIL LTTHFMEEAE RLCHRLCVIE EGRKIAEGAP SALIASEIGC DVIEIFGPDP VALRDELAPL VERTEISGET LFCYVIDAQP VHARLKQRAD LRYLHRPANL EDVFLRLTGR EMQD
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